Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 299 NP_001075109 20 299 NP_001036065 17 3301 NP_009112 17 3301 XP_006723056 17 3301 NP_055935 17 4312 NP_006292 17 4312 NP_001180440 17 4312 XP_006719652 17 4312 XP_006719651 17 4312 XP_005269195 17 4312 NP_079321 16 5631 NP_597721 16 5631 NP_001007170 16 5631 NP_005099 16 5631 XP_005261808 16 5631 XP_006713512 16 5631 XP_006713511 16 5631 NP_068741 16 7355 NP_002344 16 7355 NP_997304 16 7355 XP_005248945 16 7355 XP_005248944 16 7355 XP_005248943 16 7355 XP_005248942 16 7355 NP_001128472 15 9605 NP_004658 15 9605 NP_001128471 15 9605 NP_006823 15 9605 NP_002829 15 9605 NP_036271 15 9605 NP_061740 15 9605 NP_114442 15 9605 XP_006720790 15 9605 XP_005268334 15 9605 XP_005268333 15 9605 XP_006720789 15 9605 XP_005267342 15 9605 XP_006720073 15 9605 XP_006720072 15 9605 XP_006720071 15 9605 XP_005246783 15 9605 XP_006711535 15 9605 NP_065994 15 9605>NP_008835 Length = 4128 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKMTSMSPD 9 L+MTSMSPD Sbjct: 2563 LEMTSMSPD 2571>NP_001075109 Length = 4097 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKMTSMSPD 9 L+MTSMSPD Sbjct: 2563 LEMTSMSPD 2571>NP_001036065 Length = 821 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKMTSMSPD 9 LKM M PD Sbjct: 45 LKMVKMEPD 53>NP_009112 Length = 833 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKMTSMSPD 9 LKM M PD Sbjct: 45 LKMVKMEPD 53>XP_006723056 Length = 801 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKMTSMSPD 9 LKM M PD Sbjct: 45 LKMVKMEPD 53>NP_055935 Length = 4169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 L+M MSPD Sbjct: 459 LRMLRMSPD 467>NP_006292 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMTSMSPD 9 KM+S SPD Sbjct: 605 KMSSSSPD 612>NP_001180440 Length = 892 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMTSMSPD 9 KM+S SPD Sbjct: 638 KMSSSSPD 645>XP_006719652 Length = 759 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMTSMSPD 9 KM+S SPD Sbjct: 505 KMSSSSPD 512>XP_006719651 Length = 892 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMTSMSPD 9 KM+S SPD Sbjct: 638 KMSSSSPD 645>XP_005269195 Length = 892 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMTSMSPD 9 KM+S SPD Sbjct: 638 KMSSSSPD 645>NP_079321 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MTSMSP 8 MTSMSP Sbjct: 402 MTSMSP 407>NP_597721 Length = 744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KMTSMSPD 9 KMT++SP+ Sbjct: 9 KMTAISPE 16>NP_001007170 Length = 256 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KMTSMSPD 9 KMT++SP+ Sbjct: 9 KMTAISPE 16>NP_005099 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MTSMSPD 9 +TS+SPD Sbjct: 112 LTSLSPD 118>XP_005261808 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MTSMSP 8 MTSMSP Sbjct: 402 MTSMSP 407>XP_006713512 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MTSMSPD 9 +TS+SPD Sbjct: 112 LTSLSPD 118>XP_006713511 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MTSMSPD 9 +TS+SPD Sbjct: 85 LTSLSPD 91>NP_068741 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 +KM S+ PD Sbjct: 424 VKMESLEPD 432>NP_002344 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KMTSMSPD 9 KMT SPD Sbjct: 40 KMTVCSPD 47>NP_997304 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKMTSMSP 8 +KMTS SP Sbjct: 85 VKMTSPSP 92>XP_005248945 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 +KM S+ PD Sbjct: 424 VKMESLEPD 432>XP_005248944 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 +KM S+ PD Sbjct: 424 VKMESLEPD 432>XP_005248943 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 +KM S+ PD Sbjct: 401 VKMESLEPD 409>XP_005248942 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 +KM S+ PD Sbjct: 417 VKMESLEPD 425>NP_001128472 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 LKM ++PD Sbjct: 496 LKMQHLNPD 504>NP_004658 Length = 4834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KMTSMSPD 9 KM+S PD Sbjct: 4450 KMSSFGPD 4457>NP_001128471 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 LKM ++PD Sbjct: 496 LKMQHLNPD 504>NP_006823 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 LKM ++PD Sbjct: 496 LKMQHLNPD 504>NP_002829 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TSMSPD 9 TS+SPD Sbjct: 74 TSLSPD 79>NP_036271 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KMTSMSPD 9 K+T +SPD Sbjct: 413 KVTYLSPD 420>NP_061740 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKMTSMSPD 9 L MT+ PD Sbjct: 503 LSMTAQDPD 511>NP_114442 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKMTSMSPD 9 L MT+ PD Sbjct: 503 LSMTAQDPD 511>XP_006720790 Length = 4748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KMTSMSPD 9 KM+S PD Sbjct: 4364 KMSSFGPD 4371>XP_005268334 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KMTSMSPD 9 KM+S PD Sbjct: 4412 KMSSFGPD 4419>XP_005268333 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KMTSMSPD 9 KM+S PD Sbjct: 4412 KMSSFGPD 4419>XP_006720789 Length = 4829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KMTSMSPD 9 KM+S PD Sbjct: 4445 KMSSFGPD 4452>XP_005267342 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 LKM ++PD Sbjct: 507 LKMQHLNPD 515>XP_006720073 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 LKM ++PD Sbjct: 496 LKMQHLNPD 504>XP_006720072 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 LKM ++PD Sbjct: 507 LKMQHLNPD 515>XP_006720071 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKMTSMSPD 9 LKM ++PD Sbjct: 507 LKMQHLNPD 515>XP_005246783 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKMTSMSP 8 LK+T +SP Sbjct: 302 LKLTQVSP 309>XP_006711535 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TSMSPD 9 TS+SPD Sbjct: 74 TSLSPD 79>NP_065994 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKMTSMSP 8 LK+T +SP Sbjct: 302 LKLTQVSP 309Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.115 0.303 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 475,523 Number of extensions: 754 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |