Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_065829 18 1135 NP_006022 18 1482 XP_005261186 18 1482 XP_005261185 18 1482 XP_005261184 18 1482 XP_005261183 18 1482 XP_005261182 18 1482 XP_005261181 18 1482 NP_004813 17 2528 XP_006721658 17 2528 XP_005268711 17 2528 NP_057200 17 2528 NP_077000 17 2528 NP_570843 17 3301 NP_001128529 17 3301 NP_001277026 17 4312 NP_001139808 17 4312 NP_079133 16 5631 NP_861420 16 5631 NP_005516 16 5631 NP_001193670 16 5631 NP_001241872 16 5631 NP_001129069 16 5631 NP_060554 16 5631 NP_056526 16 5631 XP_006723243 16 5631 XP_005258890 16 5631 XP_005264484 16 5631 XP_005264483 16 5631 XP_005264480 16 5631 XP_005264478 16 5631 XP_005264475 16 5631 NP_085135 16 7355 NP_001265524 16 7355 NP_877577 16 7355 NP_005907 16 7355 NP_112170 16 7355 XP_006726516 16 7355 XP_005258413 16 7355 XP_005250405 16 7355 XP_006714534 16 7355 NP_001004488 16 7355 NP_787117 16 7355 NP_001005328 16 7355 NP_005090 15 9605 NP_001073883 15 9605 NP_001982 15 9605 XP_005257203 15 9605 XP_005257202 15 9605 XP_005257201 15 9605 XP_005267748 15 9605 XP_006711698 15 9605 NP_001180264 15 9605 NP_543140 15 9605 NP_060150 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLLL Sbjct: 3719 KKYLLLLL 3726>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLLL Sbjct: 3711 KKYLLLLL 3718>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLLL Sbjct: 3672 KKYLLLLL 3679>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLLL Sbjct: 3751 KKYLLLLL 3758>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLLL Sbjct: 3764 KKYLLLLL 3771>NP_065829 Length = 1907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 LK YLLLLL Sbjct: 1162 LKNYLLLLL 1170>NP_006022 Length = 3336 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLL+ Sbjct: 3153 KKYLLLLI 3160>XP_005261186 Length = 3139 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLL+ Sbjct: 2956 KKYLLLLI 2963>XP_005261185 Length = 3229 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLL+ Sbjct: 3046 KKYLLLLI 3053>XP_005261184 Length = 3258 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLL+ Sbjct: 3164 KKYLLLLI 3171>XP_005261183 Length = 3268 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLL+ Sbjct: 3085 KKYLLLLI 3092>XP_005261182 Length = 3346 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLL+ Sbjct: 3163 KKYLLLLI 3170>XP_005261181 Length = 3347 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 KKYLLLL+ Sbjct: 3164 KKYLLLLI 3171>NP_004813 Length = 604 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKKYLLL 7 LKKYLLL Sbjct: 552 LKKYLLL 558>XP_006721658 Length = 604 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKKYLLL 7 LKKYLLL Sbjct: 552 LKKYLLL 558>XP_005268711 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LKKYLLLL 8 LK+YLLLL Sbjct: 280 LKEYLLLL 287>NP_057200 Length = 426 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKKYLLL 7 LKKYLLL Sbjct: 413 LKKYLLL 419>NP_077000 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LKKYLLLL 8 LK+YLLLL Sbjct: 280 LKEYLLLL 287>NP_570843 Length = 581 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 LK YLLLL+ Sbjct: 3 LKHYLLLLV 11>NP_001128529 Length = 587 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 LK YLLLL+ Sbjct: 9 LKHYLLLLV 17>NP_001277026 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 L+ YLLLLL Sbjct: 49 LQAYLLLLL 57>NP_001139808 Length = 223 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 L+ YLLLLL Sbjct: 130 LQAYLLLLL 138>NP_079133 Length = 1844 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKKYLLLLL 9 LKKY LLL Sbjct: 960 LKKYFPLLL 968>NP_861420 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KKYLL +L Sbjct: 4 MKKYLLPIL 12>NP_005516 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KKYLL +L Sbjct: 4 MKKYLLPIL 12>NP_001193670 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KKYLL +L Sbjct: 4 MKKYLLPIL 12>NP_001241872 Length = 1796 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 121 VKKLLLLLL 129>NP_001129069 Length = 1870 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 121 VKKLLLLLL 129>NP_060554 Length = 1843 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 121 VKKLLLLLL 129>NP_056526 Length = 1560 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKKYLLLLL 9 L KY LLLL Sbjct: 1152 LNKYRLLLL 1160>XP_006723243 Length = 1200 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKKYLLLLL 9 L KY LLLL Sbjct: 792 LNKYRLLLL 800>XP_005258890 Length = 1560 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKKYLLLLL 9 L KY LLLL Sbjct: 1152 LNKYRLLLL 1160>XP_005264484 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 121 VKKLLLLLL 129>XP_005264483 Length = 1311 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 121 VKKLLLLLL 129>XP_005264480 Length = 1842 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 121 VKKLLLLLL 129>XP_005264478 Length = 1844 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 121 VKKLLLLLL 129>XP_005264475 Length = 2027 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 121 VKKLLLLLL 129>NP_085135 Length = 2248 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 ++YLLLLL Sbjct: 280 QQYLLLLL 287>NP_001265524 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 174 VKKALLLLL 182>NP_877577 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 174 VKKALLLLL 182>NP_005907 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 350 VKKALLLLL 358>NP_112170 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKYLLL 7 KKYLLL Sbjct: 270 KKYLLL 275>XP_006726516 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKYLLL 7 KKYLLL Sbjct: 270 KKYLLL 275>XP_005258413 Length = 2249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KKYLLLLL 9 ++YLLLLL Sbjct: 281 QQYLLLLL 288>XP_005250405 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLLLL Sbjct: 243 VKKALLLLL 251>XP_006714534 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKKYLL 6 LKKYLL Sbjct: 87 LKKYLL 92>NP_001004488 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKYLLL 7 KKYLLL Sbjct: 270 KKYLLL 275>NP_787117 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKKYLL 6 LKKYLL Sbjct: 160 LKKYLL 165>NP_001005328 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKYLLL 7 KKYLLL Sbjct: 270 KKYLLL 275>NP_005090 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 LK+YLL ++ Sbjct: 238 LKRYLLTVM 246>NP_001073883 Length = 2028 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLL+L Sbjct: 120 IKKVLLLVL 128>NP_001982 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKKYLLL 7 LKK+LLL Sbjct: 611 LKKHLLL 617>XP_005257203 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKKYLLL 7 LKK+LLL Sbjct: 571 LKKHLLL 577>XP_005257202 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKKYLLL 7 LKK+LLL Sbjct: 577 LKKHLLL 583>XP_005257201 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKKYLLL 7 LKK+LLL Sbjct: 617 LKKHLLL 623>XP_005267748 Length = 1535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 +KK LLL+L Sbjct: 120 IKKVLLLVL 128>XP_006711698 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 LK+YLL ++ Sbjct: 238 LKRYLLTVM 246>NP_001180264 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKKYLLLL 8 +K+Y+LLL Sbjct: 1 MKEYVLLL 8>NP_543140 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKKYLLLLL 9 + +Y+LLLL Sbjct: 1 MARYMLLLL 9>NP_060150 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKKYLLLL 8 +K+Y+LLL Sbjct: 1 MKEYVLLL 8Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.166 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 537,526 Number of extensions: 885 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |