Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 20 509 NP_001120972 20 509 XP_006716054 20 509 XP_006716053 20 509 XP_006716052 20 509 XP_006716051 20 509 NP_004597 18 1935 NP_001273003 18 1935 NP_620278 18 1935 XP_005262357 18 1935 XP_006724745 18 1935 XP_006724744 18 1935 XP_005262354 18 1935 XP_006724743 18 1935 XP_005262353 18 1935 XP_005262352 18 1935 NP_722516 18 1935 NP_116764 17 4312 NP_116765 17 4312 NP_001215 17 4312 NP_116107 17 4312 NP_060206 17 4312 XP_005255481 17 4312 XP_005255479 17 4312 XP_005264089 17 4312 NP_001189472 16 5631 NP_853530 16 5631 XP_006715919 16 5631 XP_006715917 16 5631 XP_005250208 16 5631 XP_005250207 16 5631 NP_079232 16 7355 NP_057726 15 9605 NP_056082 15 9605 NP_001073379 15 9605 NP_523352 15 9605 NP_056073 15 9605 NP_001106853 15 9605 NP_114118 15 9605 NP_852660 15 9605 XP_005254495 15 9605 XP_006719698 15 9605 XP_005269240 15 9605 XP_006719697 15 9605 XP_006719696 15 9605 XP_006719695 15 9605 XP_005269238 15 9605 XP_006719362 15 9605 XP_006718161 15 9605 XP_006718160 15 9605 XP_006718159 15 9605 XP_006718158 15 9605 XP_006718157 15 9605 XP_006718156 15 9605 XP_006718075 15 9605 XP_006718074 15 9605 XP_006718073 15 9605 XP_006718072 15 9605 XP_006718071 15 9605 XP_006718070 15 9605 XP_005277720 15 9605 XP_005277718 15 9605 XP_006717082 15 9605 XP_006717081 15 9605 XP_006712889 15 9605 NP_067016 15 9605>NP_000236 Length = 1390 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKKTRV+LG Sbjct: 598 LKKTRVLLG 606>NP_001120972 Length = 1408 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKKTRV+LG Sbjct: 598 LKKTRVLLG 606>XP_006716054 Length = 960 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKKTRV+LG Sbjct: 168 LKKTRVLLG 176>XP_006716053 Length = 960 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKKTRV+LG Sbjct: 168 LKKTRVLLG 176>XP_006716052 Length = 1409 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKKTRV+LG Sbjct: 617 LKKTRVLLG 625>XP_006716051 Length = 1427 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKKTRV+LG Sbjct: 617 LKKTRVLLG 625>NP_004597 Length = 1893 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 556 LKKSRILLG 564>NP_001273003 Length = 1895 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 556 LKKSRILLG 564>NP_620278 Length = 1872 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 535 LKKSRILLG 543>XP_005262357 Length = 999 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 556 LKKSRILLG 564>XP_006724745 Length = 1800 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 429 LKKSRILLG 437>XP_006724744 Length = 1851 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 556 LKKSRILLG 564>XP_005262354 Length = 1906 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 535 LKKSRILLG 543>XP_006724743 Length = 1924 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 556 LKKSRILLG 564>XP_005262353 Length = 1926 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 556 LKKSRILLG 564>XP_005262352 Length = 1927 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 556 LKKSRILLG 564>NP_722516 Length = 1826 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LKKTRVVLG 9 LKK+R++LG Sbjct: 554 LKKSRILLG 562>NP_116764 Length = 452 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 LKK RVVL Sbjct: 40 LKKNRVVL 47>NP_116765 Length = 108 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 LKK RVVL Sbjct: 40 LKKNRVVL 47>NP_001215 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 LKK RVVL Sbjct: 9 LKKNRVVL 16>NP_116107 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKTRVVLG 9 L+KT V+LG Sbjct: 234 LRKTHVLLG 242>NP_060206 Length = 353 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKTRVVL 8 KKTRV+L Sbjct: 154 KKTRVIL 160>XP_005255481 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKTRVVL 8 KKTRV+L Sbjct: 240 KKTRVIL 246>XP_005255479 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKTRVVL 8 KKTRV+L Sbjct: 240 KKTRVIL 246>XP_005264089 Length = 413 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKKTRVVLG 9 L+KT V+LG Sbjct: 173 LRKTHVLLG 181>NP_001189472 Length = 1516 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 LKK RVVL Sbjct: 1255 LKKPRVVL 1262>NP_853530 Length = 1505 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 LKK RVVL Sbjct: 1244 LKKPRVVL 1251>XP_006715919 Length = 1494 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 LKK RVVL Sbjct: 1233 LKKPRVVL 1240>XP_006715917 Length = 1583 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 LKK RVVL Sbjct: 1322 LKKPRVVL 1329>XP_005250208 Length = 1603 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 LKK RVVL Sbjct: 1342 LKKPRVVL 1349>XP_005250207 Length = 1604 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 LKK RVVL Sbjct: 1343 LKKPRVVL 1350>NP_079232 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKKTRVV 7 LKKTRV+ Sbjct: 125 LKKTRVM 131>NP_057726 Length = 3674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRVVLG 9 TRVVLG Sbjct: 2949 TRVVLG 2954>NP_056082 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 +KK RVVL Sbjct: 1168 IKKPRVVL 1175>NP_001073379 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KKTRVVLG 9 +KT+++LG Sbjct: 551 QKTQIILG 558>NP_523352 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKKTRVVLG 9 L+K+R +LG Sbjct: 388 LEKSRFILG 396>NP_056073 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKKTRV 6 LKKTRV Sbjct: 779 LKKTRV 784>NP_001106853 Length = 2093 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKTRVVLG 9 K+TRVV G Sbjct: 32 KRTRVVEG 39>NP_114118 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 332 KKTSAVLG 339>NP_852660 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 332 KKTSAVLG 339>XP_005254495 Length = 3694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TRVVLG 9 TRVVLG Sbjct: 2969 TRVVLG 2974>XP_006719698 Length = 899 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KKTRVVLG 9 +KT+++LG Sbjct: 551 QKTQIILG 558>XP_005269240 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KKTRVVLG 9 +KT+++LG Sbjct: 551 QKTQIILG 558>XP_006719697 Length = 1658 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KKTRVVLG 9 +KT+++LG Sbjct: 551 QKTQIILG 558>XP_006719696 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KKTRVVLG 9 +KT+++LG Sbjct: 551 QKTQIILG 558>XP_006719695 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KKTRVVLG 9 +KT+++LG Sbjct: 551 QKTQIILG 558>XP_005269238 Length = 1696 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 KKTRVVLG 9 +KT+++LG Sbjct: 551 QKTQIILG 558>XP_006719362 Length = 1546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 +KK RVVL Sbjct: 1228 IKKPRVVL 1235>XP_006718161 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 216 KKTSAVLG 223>XP_006718160 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 332 KKTSAVLG 339>XP_006718159 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 322 KKTSAVLG 329>XP_006718158 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 332 KKTSAVLG 339>XP_006718157 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 339 KKTSAVLG 346>XP_006718156 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 385 KKTSAVLG 392>XP_006718075 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 216 KKTSAVLG 223>XP_006718074 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 332 KKTSAVLG 339>XP_006718073 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 339 KKTSAVLG 346>XP_006718072 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 339 KKTSAVLG 346>XP_006718071 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 339 KKTSAVLG 346>XP_006718070 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 322 KKTSAVLG 329>XP_005277720 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 339 KKTSAVLG 346>XP_005277718 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKTRVVLG 9 KKT VLG Sbjct: 385 KKTSAVLG 392>XP_006717082 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKKTRV 6 LKKTRV Sbjct: 711 LKKTRV 716>XP_006717081 Length = 1209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKKTRV 6 LKKTRV Sbjct: 769 LKKTRV 774>XP_006712889 Length = 2069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKTRVVLG 9 K+TRVV G Sbjct: 32 KRTRVVEG 39>NP_067016 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKKTRVVL 8 +KK RVVL Sbjct: 255 MKKKRVVL 262Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.144 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 404,101 Number of extensions: 709 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |