Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001001557 19 665 NP_689707 17 2528 NP_001137159 17 2528 NP_061881 17 3301 NP_004806 17 4312 XP_006711111 17 4312 NP_114113 16 7355 NP_004729 16 7355 NP_775864 16 7355 NP_001230166 16 7355 XP_006723951 16 7355 XP_005260860 16 7355 XP_005260859 16 7355 XP_005260858 16 7355 XP_005260857 16 7355 XP_006723671 16 7355 XP_006723670 16 7355 XP_005260854 16 7355 XP_006723669 16 7355 XP_006719018 16 7355 XP_006719016 16 7355 XP_006719015 16 7355 XP_005251183 16 7355 NP_071927 16 7355 NP_919415 16 7355 NP_003565 16 7355 NP_001124334 16 7355 NP_006470 16 7355 NP_006556 15 9605 NP_000446 15 9605 NP_000159 15 9605 NP_009122 15 9605 NP_009089 15 9605 NP_001007554 15 9605 NP_001229820 15 9605 NP_001123995 15 9605 NP_001229822 15 9605 NP_001229821 15 9605 NP_006306 15 9605 NP_001093112 15 9605 NP_079527 15 9605 NP_065827 15 9605 NP_060818 15 9605 NP_055871 15 9605 XP_005259675 15 9605 XP_005259674 15 9605 XP_005258376 15 9605 XP_005258375 15 9605 XP_005258374 15 9605 XP_006722574 15 9605 XP_006722573 15 9605 XP_005258372 15 9605 XP_005256104 15 9605 XP_005256103 15 9605 XP_005255832 15 9605 XP_006716724 15 9605 XP_005249761 15 9605 XP_005249760 15 9605 XP_006713915 15 9605 XP_005272311 15 9605 XP_005272310 15 9605 XP_005272309 15 9605 XP_005272307 15 9605>NP_001001557 Length = 455 Score = 19.2 bits (38), Expect = 665 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KKSKLRCS 9 KKS+LRCS Sbjct: 348 KKSRLRCS 355>NP_689707 Length = 706 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKLRCS 9 K+KLRCS Sbjct: 243 KTKLRCS 249>NP_001137159 Length = 681 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKLRCS 9 K+KLRCS Sbjct: 218 KTKLRCS 224>NP_061881 Length = 463 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LKKSKLRCS 9 LKKS+LR S Sbjct: 126 LKKSRLRMS 134>NP_004806 Length = 1261 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKKSKLRC 8 LKK+KL C Sbjct: 325 LKKAKLLC 332>XP_006711111 Length = 1197 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LKKSKLRC 8 LKK+KL C Sbjct: 261 LKKAKLLC 268>NP_114113 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKSK CS Sbjct: 204 KKSKADCS 211>NP_004729 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 L SKLRC Sbjct: 114 LMDSKLRC 121>NP_775864 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LKKSKLR 7 LK+SKLR Sbjct: 838 LKRSKLR 844>NP_001230166 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 LKK+K CS Sbjct: 95 LKKTKETCS 103>XP_006723951 Length = 147 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 L SKLRC Sbjct: 18 LMDSKLRC 25>XP_005260860 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKS +CS Sbjct: 313 KKSNFKCS 320>XP_005260859 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKS +CS Sbjct: 313 KKSNFKCS 320>XP_005260858 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKS +CS Sbjct: 313 KKSNFKCS 320>XP_005260857 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKS +CS Sbjct: 313 KKSNFKCS 320>XP_006723671 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKS +CS Sbjct: 313 KKSNFKCS 320>XP_006723670 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKS +CS Sbjct: 313 KKSNFKCS 320>XP_005260854 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKS +CS Sbjct: 313 KKSNFKCS 320>XP_006723669 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKS +CS Sbjct: 313 KKSNFKCS 320>XP_006719018 Length = 217 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 KKSK +C+ Sbjct: 113 KKSKSKCN 120>XP_006719016 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 KKSK +C+ Sbjct: 161 KKSKSKCN 168>XP_006719015 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 KKSK +C+ Sbjct: 231 KKSKSKCN 238>XP_005251183 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 LKK+K CS Sbjct: 95 LKKTKETCS 103>NP_071927 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KKSKLRCS 9 KKS +CS Sbjct: 313 KKSNFKCS 320>NP_919415 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 L SKLRC Sbjct: 121 LMDSKLRC 128>NP_003565 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 L SKLRC Sbjct: 121 LMDSKLRC 128>NP_001124334 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 KKSK +C+ Sbjct: 248 KKSKSKCN 255>NP_006470 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 KKSK +C+ Sbjct: 231 KKSKSKCN 238>NP_006556 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKSKLR 7 KKSKLR Sbjct: 208 KKSKLR 213>NP_000446 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LKKSKLR 7 LKK KLR Sbjct: 80 LKKKKLR 86>NP_000159 Length = 1580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 L SKL+C Sbjct: 1172 LSSSKLKC 1179>NP_009122 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KSKLRCS 9 KSK +CS Sbjct: 291 KSKCKCS 297>NP_009089 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 LKK + RC Sbjct: 148 LKKKQARC 155>NP_001007554 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 LKK + RC Sbjct: 179 LKKKQARC 186>NP_001229820 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 LKK + RC Sbjct: 225 LKKKQARC 232>NP_001123995 Length = 813 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 LKK + RC Sbjct: 194 LKKKQARC 201>NP_001229822 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 LKK + RC Sbjct: 148 LKKKQARC 155>NP_001229821 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 LKK + RC Sbjct: 179 LKKKQARC 186>NP_006306 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 LK+ +RCS Sbjct: 169 LKRKWIRCS 177>NP_001093112 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 +KKS + CS Sbjct: 420 VKKSSIGCS 428>NP_079527 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKSKLR 7 KKSKLR Sbjct: 855 KKSKLR 860>NP_065827 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 +KS L+CS Sbjct: 196 RKSTLQCS 203>NP_060818 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 +KKS + CS Sbjct: 420 VKKSSIGCS 428>NP_055871 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LKKSKLR 7 LKK KLR Sbjct: 631 LKKQKLR 637>XP_005259675 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LKKSKLR 7 LKK KLR Sbjct: 80 LKKKKLR 86>XP_005259674 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LKKSKLR 7 LKK KLR Sbjct: 80 LKKKKLR 86>XP_005258376 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 +KS L+CS Sbjct: 88 RKSTLQCS 95>XP_005258375 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 +KS L+CS Sbjct: 151 RKSTLQCS 158>XP_005258374 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 +KS L+CS Sbjct: 192 RKSTLQCS 199>XP_006722574 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 +KS L+CS Sbjct: 196 RKSTLQCS 203>XP_006722573 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 +KS L+CS Sbjct: 192 RKSTLQCS 199>XP_005258372 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKSKLRCS 9 +KS L+CS Sbjct: 196 RKSTLQCS 203>XP_005256104 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 +KKS + CS Sbjct: 420 VKKSSIGCS 428>XP_005256103 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 +KKS + CS Sbjct: 420 VKKSSIGCS 428>XP_005255832 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKSKLR 7 KKSKLR Sbjct: 208 KKSKLR 213>XP_006716724 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKSKLR 7 KKSKLR Sbjct: 711 KKSKLR 716>XP_005249761 Length = 1580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 L SKL+C Sbjct: 1172 LSSSKLKC 1179>XP_005249760 Length = 1580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LKKSKLRC 8 L SKL+C Sbjct: 1172 LSSSKLKC 1179>XP_006713915 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 LK+ +RCS Sbjct: 135 LKRKWIRCS 143>XP_005272311 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 LK+ +RCS Sbjct: 135 LKRKWIRCS 143>XP_005272310 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 LK+ +RCS Sbjct: 135 LKRKWIRCS 143>XP_005272309 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 LK+ +RCS Sbjct: 169 LKRKWIRCS 177>XP_005272307 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKKSKLRCS 9 LK+ +RCS Sbjct: 169 LKRKWIRCS 177Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.126 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 621,479 Number of extensions: 1004 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |