Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_036562 17 4312 NP_620482 16 5631 NP_001077084 16 5631 NP_060883 16 5631 XP_006726609 16 5631 XP_006719787 16 5631 XP_006712362 16 5631 XP_006710027 16 5631 NP_001167453 16 5631 NP_877963 16 7355 NP_002651 16 7355 NP_002652 16 7355 NP_877949 16 7355 NP_000924 16 7355 NP_001166117 16 7355 NP_588614 16 7355 NP_001730 16 7355 NP_149114 16 7355 XP_005260495 16 7355 XP_005260785 16 7355 XP_006723635 16 7355 XP_006723634 16 7355 XP_006723633 16 7355 XP_005260781 16 7355 XP_006723632 16 7355 XP_006723631 16 7355 XP_005253583 16 7355 XP_005253581 16 7355 XP_005253580 16 7355 XP_006719225 16 7355 XP_005253579 16 7355 XP_005253578 16 7355 XP_005253577 16 7355 XP_005253576 16 7355 NP_001188326 15 9605 NP_001159751 15 9605 NP_055686 15 9605 NP_001120932 15 9605 NP_078966 15 9605 NP_006085 15 9605 NP_006216 15 9605 NP_001157743 15 9605 NP_872584 15 9605 NP_001124436 15 9605 NP_001186758 15 9605 NP_001028774 15 9605 NP_001002926 15 9605 NP_705833 15 9605 XP_005266332 15 9605 XP_005273432 15 9605 XP_005273431 15 9605 XP_005247174 15 9605 XP_006711632 15 9605 NP_115508 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKISSSHQT 9 LKISSS+QT Sbjct: 2786 LKISSSNQT 2794>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKISSSHQT 9 LKISSS+QT Sbjct: 2778 LKISSSNQT 2786>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKISSSHQT 9 LKISSS+QT Sbjct: 2739 LKISSSNQT 2747>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKISSSHQT 9 LKISSS+QT Sbjct: 2818 LKISSSNQT 2826>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LKISSSHQT 9 LKISSS+QT Sbjct: 2831 LKISSSNQT 2839>NP_036562 Length = 307 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KISSSHQ 8 KISS+HQ Sbjct: 177 KISSAHQ 183>NP_620482 Length = 1341 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISS HQT Sbjct: 620 ISSQHQT 626>NP_001077084 Length = 1314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISS HQT Sbjct: 620 ISSQHQT 626>NP_060883 Length = 352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISS HQT Sbjct: 322 ISSEHQT 328>XP_006726609 Length = 2838 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 L ISS HQT Sbjct: 1962 LVISSYHQT 1970>XP_006719787 Length = 2838 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 L ISS HQT Sbjct: 1962 LVISSYHQT 1970>XP_006712362 Length = 1350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISS HQT Sbjct: 629 ISSQHQT 635>XP_006710027 Length = 2837 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 L ISS HQT Sbjct: 1961 LVISSYHQT 1969>NP_001167453 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISS HQT Sbjct: 317 ISSEHQT 323>NP_877963 Length = 1290 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 331 ISSSHNT 337>NP_002651 Length = 1291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 331 ISSSHNT 337>NP_002652 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 323 ISSSHNT 329>NP_877949 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 324 ISSSHNT 330>NP_000924 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 324 ISSSHNT 330>NP_001166117 Length = 1187 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 324 ISSSHNT 330>NP_588614 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 348 ISSSHNT 354>NP_001730 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ + HQT Sbjct: 184 LKLGAHHQT 192>NP_149114 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 166 ISSSHNT 172>XP_005260495 Length = 1330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 331 ISSSHNT 337>XP_005260785 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 56 ISSSHNT 62>XP_006723635 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 324 ISSSHNT 330>XP_006723634 Length = 1187 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 324 ISSSHNT 330>XP_006723633 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 324 ISSSHNT 330>XP_005260781 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 324 ISSSHNT 330>XP_006723632 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 324 ISSSHNT 330>XP_006723631 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 324 ISSSHNT 330>XP_005253583 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 62 ISSSHNT 68>XP_005253581 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 38 ISSSHNT 44>XP_005253580 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 62 ISSSHNT 68>XP_006719225 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 62 ISSSHNT 68>XP_005253579 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 166 ISSSHNT 172>XP_005253578 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 166 ISSSHNT 172>XP_005253577 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 166 ISSSHNT 172>XP_005253576 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 ISSSH T Sbjct: 166 ISSSHNT 172>NP_001188326 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ S H+T Sbjct: 75 LKLRSGHRT 83>NP_001159751 Length = 1201 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KISSSHQT 9 KISS H T Sbjct: 1052 KISSKHLT 1059>NP_055686 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KISSSHQT 9 KISS H T Sbjct: 1049 KISSKHLT 1056>NP_001120932 Length = 1202 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KISSSHQT 9 KISS H T Sbjct: 1053 KISSKHLT 1060>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KISSSHQT 9 ++SSSH T Sbjct: 473 QVSSSHPT 480>NP_006085 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ SSH + Sbjct: 237 LKLKSSHHS 245>NP_006216 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 +SSSH T Sbjct: 307 VSSSHNT 313>NP_001157743 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ SSH + Sbjct: 163 LKLKSSHHS 171>NP_872584 Length = 1528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ SSH + Sbjct: 674 LKLKSSHHS 682>NP_001124436 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ISSSHQT 9 +SSSH T Sbjct: 328 VSSSHNT 334>NP_001186758 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KISSSHQT 9 KIS+ HQ+ Sbjct: 19 KISTEHQS 26>NP_001028774 Length = 1379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LKISSSH 7 L++SSSH Sbjct: 52 LEVSSSH 58>NP_001002926 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KISSSH 7 K+SSSH Sbjct: 137 KVSSSH 142>NP_705833 Length = 2970 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ +H+T Sbjct: 1806 LKVKEAHET 1814>XP_005266332 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ S H+T Sbjct: 75 LKLRSGHRT 83>XP_005273432 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ SSH + Sbjct: 271 LKLKSSHHS 279>XP_005273431 Length = 1528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ SSH + Sbjct: 674 LKLKSSHHS 682>XP_005247174 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LKISSSHQT 9 LK+ +H+T Sbjct: 1515 LKVKEAHET 1523>XP_006711632 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KISSSHQT 9 KIS+ HQ+ Sbjct: 19 KISTEHQS 26>NP_115508 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KISSSHQT 9 KIS+ HQ+ Sbjct: 19 KISTEHQS 26Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.107 0.256 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 607,023 Number of extensions: 714 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |