Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1935 NP_001035957 18 1935 XP_006721990 18 1935 XP_006721989 18 1935 XP_005258041 18 1935 XP_006721988 18 1935 XP_006721987 18 1935 XP_006721986 18 1935 XP_005258040 18 1935 XP_006721985 18 1935 XP_006717971 17 3301 NP_065883 17 4312 NP_036325 17 4312 NP_776152 17 4312 XP_005245423 17 4312 XP_005245425 17 4312 NP_002652 16 7355 NP_068775 16 7355 NP_056175 16 7355 NP_001269065 16 7355 NP_001916 16 7355 NP_001138587 16 7355 XP_006722562 16 7355 XP_006722561 16 7355 XP_006722560 16 7355 XP_006722559 16 7355 XP_005266781 16 7355 XP_006722558 16 7355 XP_005266780 16 7355 XP_005266779 16 7355 XP_005267003 16 7355 XP_005267002 16 7355 XP_005248831 16 7355 XP_005248830 16 7355 XP_006715361 16 7355 NP_060651 16 7355 NP_036547 15 9605 NP_001192192 15 9605 NP_001156597 15 9605 NP_001156596 15 9605 NP_001156592 15 9605 NP_001156602 15 9605 NP_001030008 15 9605 NP_663629 15 9605 NP_001156593 15 9605 NP_001156594 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_789792 15 9605 NP_009114 15 9605 NP_079384 15 9605 NP_001004301 15 9605 NP_055445 15 9605 NP_079335 15 9605 XP_006723069 15 9605 XP_006721018 15 9605 XP_005255053 15 9605 XP_006720074 15 9605 XP_006718281 15 9605 XP_005252817 15 9605 XP_006715631 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_803875 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_000258 Length = 2818 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1679 LKGSKRLVF 1687>NP_001035957 Length = 2839 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1700 LKGSKRLVF 1708>XP_006721990 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1710 LKGSKRLVF 1718>XP_006721989 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1710 LKGSKRLVF 1718>XP_005258041 Length = 2836 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1679 LKGSKRLVF 1687>XP_006721988 Length = 2846 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1689 LKGSKRLVF 1697>XP_006721987 Length = 2849 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1710 LKGSKRLVF 1718>XP_006721986 Length = 2854 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1697 LKGSKRLVF 1705>XP_005258040 Length = 2857 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1700 LKGSKRLVF 1708>XP_006721985 Length = 2867 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 LK SKRLVF Sbjct: 1710 LKGSKRLVF 1718>XP_006717971 Length = 559 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 CS RLVF Sbjct: 546 CSSRLVF 552>NP_065883 Length = 1237 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CSKRLVF 9 C++RLVF Sbjct: 566 CARRLVF 572>NP_036325 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KCSKRLV 8 KCS RLV Sbjct: 506 KCSNRLV 512>NP_776152 Length = 1154 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 L+CS+ L+F Sbjct: 328 LECSRLLIF 336>XP_005245423 Length = 1246 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CSKRLVF 9 C++RLVF Sbjct: 575 CARRLVF 581>XP_005245425 Length = 1299 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CSKRLVF 9 C++RLVF Sbjct: 628 CARRLVF 634>NP_002652 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KCSKRL 7 KC+KRL Sbjct: 1248 KCNKRL 1253>NP_068775 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKCSKRL 7 LKC +RL Sbjct: 869 LKCQRRL 875>NP_056175 Length = 1042 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 LKC KR++ Sbjct: 851 LKCRKRVL 858>NP_001269065 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KCSKRL 7 KCSK+L Sbjct: 232 KCSKKL 237>NP_001916 Length = 97 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 CS RLVF Sbjct: 65 CSCRLVF 71>NP_001138587 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KCSKRLVF 9 KC KR+ F Sbjct: 127 KCKKRVQF 134>XP_006722562 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722561 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722560 Length = 1295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722559 Length = 1297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005266781 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722558 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005266780 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005266779 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005267003 Length = 859 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKCSKRL 7 LKC +RL Sbjct: 820 LKCQRRL 826>XP_005267002 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKCSKRL 7 LKC +RL Sbjct: 869 LKCQRRL 875>XP_005248831 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KCSKRL 7 KCSK+L Sbjct: 134 KCSKKL 139>XP_005248830 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KCSKRL 7 KCSK+L Sbjct: 232 KCSKKL 237>XP_006715361 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KCSKRL 7 KCSK+L Sbjct: 232 KCSKKL 237>NP_060651 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 C+K LVF Sbjct: 649 CTKNLVF 655>NP_036547 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 LKCSKRLV 8 L C KR++ Sbjct: 450 LSCEKRII 457>NP_001192192 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 LKCSKRLV 8 L C KR++ Sbjct: 266 LSCEKRII 273>NP_001156597 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CSKR++ Sbjct: 104 CSKRII 109>NP_001156596 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CSKR++ Sbjct: 104 CSKRII 109>NP_001156592 Length = 166 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CSKR++ Sbjct: 127 CSKRII 132>NP_001156602 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CSKR++ Sbjct: 104 CSKRII 109>NP_001030008 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CSKR++ Sbjct: 127 CSKRII 132>NP_663629 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CSKR++ Sbjct: 127 CSKRII 132>NP_001156593 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CSKR++ Sbjct: 127 CSKRII 132>NP_001156594 Length = 228 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CSKR++ Sbjct: 104 CSKRII 109>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 17369 IKCNKRRI 17376>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 17494 IKCNKRRI 17501>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 24793 IKCNKRRI 24800>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 23866 IKCNKRRI 23873>NP_789792 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 L C+KRL+ Sbjct: 1010 LICNKRLI 1017>NP_009114 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKCSKRL 7 L CS+RL Sbjct: 127 LSCSRRL 133>NP_079384 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CS+RLV Sbjct: 6 CSRRLV 11>NP_001004301 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKCSKRL 7 LKC +RL Sbjct: 398 LKCHRRL 404>NP_055445 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 CSK L+F Sbjct: 620 CSKTLLF 626>NP_079335 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC +RLV Sbjct: 676 IKCLERLV 683>XP_006723069 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKCSKRL 7 LKC +RL Sbjct: 398 LKCHRRL 404>XP_006721018 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CSKRLV 8 CS+RLV Sbjct: 6 CSRRLV 11>XP_005255053 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CSKRLVF 9 CSK L+F Sbjct: 620 CSKTLLF 626>XP_006720074 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKCSKRL 7 L CS+RL Sbjct: 19 LSCSRRL 25>XP_006718281 Length = 983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 L C+KRL+ Sbjct: 900 LICNKRLI 907>XP_005252817 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LKCSKRL 7 L CS+RL Sbjct: 142 LSCSRRL 148>XP_006715631 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC +RLV Sbjct: 609 IKCLERLV 616>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 13106 IKCNKRRI 13113>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 14465 IKCNKRRI 14472>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 24421 IKCNKRRI 24428>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 25927 IKCNKRRI 25934>NP_803875 Length = 4243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LKCSKRLVF 9 +K SKRL+F Sbjct: 1550 VKNSKRLLF 1558>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 26434 IKCNKRRI 26441>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LKCSKRLV 8 +KC+KR + Sbjct: 17561 IKCNKRRI 17568Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.147 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 724,901 Number of extensions: 1396 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |