Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 665 NP_001185763 19 665 NP_055459 19 665 XP_006726410 19 665 XP_006711719 19 665 XP_006711718 19 665 XP_006711717 19 665 XP_006711716 19 665 XP_006711715 19 665 XP_006711714 19 665 XP_006711713 19 665 XP_006711711 19 665 XP_006711710 19 665 XP_006711709 19 665 XP_005277503 19 665 XP_005273038 19 665 XP_005277500 19 665 XP_006711707 19 665 XP_005277499 19 665 XP_006711706 19 665 XP_006711705 19 665 XP_006711164 19 665 XP_006726412 18 1935 XP_006711760 18 1935 XP_005276153 17 2528 XP_003846805 17 2528 NP_054784 17 3301 NP_001275879 17 3301 XP_006713672 17 3301 NP_149120 16 5631 NP_000827 16 5631 NP_085126 16 7355 NP_001136116 16 7355 NP_001269777 16 7355 NP_690608 16 7355 NP_004674 16 7355 XP_005246927 16 7355 XP_005246925 16 7355 XP_006712841 16 7355 XP_005246924 16 7355 XP_006712840 16 7355 NP_001269365 15 9605 NP_001269366 15 9605 NP_776170 15 9605 NP_001269367 15 9605 NP_001001342 15 9605 NP_001269368 15 9605 NP_001539 15 9605 NP_001257856 15 9605 NP_001273587 15 9605 NP_001138626 15 9605 NP_001273588 15 9605 NP_055647 15 9605 NP_001364 15 9605 NP_001240841 15 9605 NP_055988 15 9605 NP_001257859 15 9605 NP_001257857 15 9605 NP_001257858 15 9605 XP_005266662 15 9605 XP_006719966 15 9605 XP_006719965 15 9605 XP_005266660 15 9605 XP_006714064 15 9605 XP_005262708 15 9605 XP_005262706 15 9605 XP_006714063 15 9605 XP_005262705 15 9605 XP_006714062 15 9605 XP_005262704 15 9605 XP_005262703 15 9605 XP_006711798 15 9605>NP_001185761 Length = 2240 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 1921 LKAYSLDA 1928>NP_001185763 Length = 2362 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2027 LKAYSLDA 2034>NP_055459 Length = 2346 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2027 LKAYSLDA 2034>XP_006726410 Length = 2087 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 1768 LKAYSLDA 1775>XP_006711719 Length = 2302 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 1983 LKAYSLDA 1990>XP_006711718 Length = 1436 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 1034 LKAYSLDA 1041>XP_006711717 Length = 2385 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 1983 LKAYSLDA 1990>XP_006711716 Length = 2411 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2092 LKAYSLDA 2099>XP_006711715 Length = 2428 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2026 LKAYSLDA 2033>XP_006711714 Length = 2429 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2027 LKAYSLDA 2034>XP_006711713 Length = 2432 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2030 LKAYSLDA 2037>XP_006711711 Length = 2482 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2080 LKAYSLDA 2087>XP_006711710 Length = 2494 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2092 LKAYSLDA 2099>XP_006711709 Length = 2495 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2093 LKAYSLDA 2100>XP_005277503 Length = 2498 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2190 LKAYSLDA 2197>XP_005273038 Length = 2509 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2190 LKAYSLDA 2197>XP_005277500 Length = 2525 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2190 LKAYSLDA 2197>XP_006711707 Length = 2553 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2190 LKAYSLDA 2197>XP_005277499 Length = 2561 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2190 LKAYSLDA 2197>XP_006711706 Length = 2591 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2189 LKAYSLDA 2196>XP_006711705 Length = 2592 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 2190 LKAYSLDA 2197>XP_006711164 Length = 2087 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LKAYSLDA 8 LKAYSLDA Sbjct: 1768 LKAYSLDA 1775>XP_006726412 Length = 140 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKAYSLD 7 LKAYSLD Sbjct: 99 LKAYSLD 105>XP_006711760 Length = 140 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LKAYSLD 7 LKAYSLD Sbjct: 99 LKAYSLD 105>XP_005276153 Length = 267 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKAYSLDA 8 L AYSLDA Sbjct: 23 LSAYSLDA 30>XP_003846805 Length = 306 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LKAYSLDA 8 L AYSLDA Sbjct: 23 LSAYSLDA 30>NP_054784 Length = 679 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KAYSLDAF 9 K +SLDAF Sbjct: 196 KCFSLDAF 203>NP_001275879 Length = 704 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KAYSLDAF 9 K +SLDAF Sbjct: 196 KCFSLDAF 203>XP_006713672 Length = 452 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KAYSLDAF 9 K +SLDAF Sbjct: 196 KCFSLDAF 203>NP_149120 Length = 307 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYSLDAF 9 +YS+DAF Sbjct: 105 SYSMDAF 111>NP_000827 Length = 1336 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LKAYSLDAF 9 LKA LDAF Sbjct: 748 LKAGKLDAF 756>NP_085126 Length = 1671 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAYSLDAF 9 +KA SLD F Sbjct: 1255 IKANSLDGF 1263>NP_001136116 Length = 1700 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAYSLDAF 9 +KA SLD F Sbjct: 1255 IKANSLDGF 1263>NP_001269777 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYSLDAF 9 +YS+DAF Sbjct: 119 SYSVDAF 125>NP_690608 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYSLDAF 9 +YS+DAF Sbjct: 172 SYSVDAF 178>NP_004674 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYSLDAF 9 +YS+DAF Sbjct: 172 SYSVDAF 178>XP_005246927 Length = 1683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAYSLDAF 9 +KA SLD F Sbjct: 1238 IKANSLDGF 1246>XP_005246925 Length = 1696 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAYSLDAF 9 +KA SLD F Sbjct: 1251 IKANSLDGF 1259>XP_006712841 Length = 1696 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAYSLDAF 9 +KA SLD F Sbjct: 1280 IKANSLDGF 1288>XP_005246924 Length = 1713 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAYSLDAF 9 +KA SLD F Sbjct: 1268 IKANSLDGF 1276>XP_006712840 Length = 1725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAYSLDAF 9 +KA SLD F Sbjct: 1280 IKANSLDGF 1288>NP_001269365 Length = 95 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AYSLDAF 9 AY LDA+ Sbjct: 75 AYKLDAY 81>NP_001269366 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AYSLDAF 9 AY LDA+ Sbjct: 79 AYKLDAY 85>NP_776170 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AYSLDAF 9 AY LDA+ Sbjct: 122 AYKLDAY 128>NP_001269367 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AYSLDAF 9 AY LDA+ Sbjct: 79 AYKLDAY 85>NP_001001342 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AYSLDAF 9 AY LDA+ Sbjct: 79 AYKLDAY 85>NP_001269368 Length = 141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AYSLDAF 9 AY LDA+ Sbjct: 122 AYKLDAY 128>NP_001539 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKAYSLDAF 9 + AY LD F Sbjct: 183 ISAYRLDGF 191>NP_001257856 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKAYSLDAF 9 + AY LD F Sbjct: 183 ISAYRLDGF 191>NP_001273587 Length = 1290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 987 LKAYSL 992>NP_001138626 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KAYSLDAF 9 + YSLD F Sbjct: 330 RTYSLDEF 337>NP_001273588 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 932 LKAYSL 937>NP_055647 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 995 LKAYSL 1000>NP_001364 Length = 4515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KAYSLDAF 9 + YSLD F Sbjct: 330 RTYSLDEF 337>NP_001240841 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 971 LKAYSL 976>NP_055988 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 877 LKAYSL 882>NP_001257859 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKAYSLDAF 9 + AY LD F Sbjct: 152 ISAYRLDGF 160>NP_001257857 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKAYSLDAF 9 + AY LD F Sbjct: 152 ISAYRLDGF 160>NP_001257858 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LKAYSLDAF 9 + AY LD F Sbjct: 152 ISAYRLDGF 160>XP_005266662 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 814 LKAYSL 819>XP_006719966 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 837 LKAYSL 842>XP_006719965 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 940 LKAYSL 945>XP_005266660 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 970 LKAYSL 975>XP_006714064 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 255 LKAYSL 260>XP_005262708 Length = 1039 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 748 LKAYSL 753>XP_005262706 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 855 LKAYSL 860>XP_006714063 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 877 LKAYSL 882>XP_005262705 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 890 LKAYSL 895>XP_006714062 Length = 1262 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 971 LKAYSL 976>XP_005262704 Length = 1262 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 971 LKAYSL 976>XP_005262703 Length = 1275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LKAYSL 6 LKAYSL Sbjct: 984 LKAYSL 989>XP_006711798 Length = 4586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KAYSLDAF 9 + YSLD F Sbjct: 330 RTYSLDEF 337Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.138 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 512,123 Number of extensions: 785 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |