Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 18 1935 XP_006717990 18 1935 XP_006717989 18 1935 NP_110413 17 4312 NP_001155180 17 4312 NP_001157849 16 5631 XP_005264064 16 5631 XP_005264063 16 5631 XP_005264062 16 5631 XP_005264061 16 5631 XP_005264059 16 5631 NP_001104026 16 7355 NP_001449 16 7355 NP_001120959 16 7355 NP_001447 16 7355 NP_001073291 16 7355 NP_000417 16 7355 NP_001258779 16 7355 NP_001275949 16 7355 NP_659464 16 7355 NP_954863 16 7355 XP_006715973 16 7355 XP_005267039 16 7355 XP_005267038 16 7355 XP_005248961 16 7355 NP_570141 16 7355 NP_001135440 16 7355 NP_001182156 15 9605 NP_060106 15 9605 NP_001161147 15 9605 NP_001161146 15 9605 NP_694854 15 9605 NP_000921 15 9605 NP_127509 15 9605 NP_067012 15 9605 NP_001120645 15 9605 NP_001164564 15 9605 NP_653236 15 9605 XP_005259075 15 9605 XP_005259074 15 9605 XP_006723312 15 9605 XP_005247172 15 9605 XP_005247171 15 9605 XP_005247170 15 9605 XP_006713145 15 9605 XP_006713144 15 9605>NP_000305 Length = 403 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKAQEALYF 9 LKAQEAL F Sbjct: 146 LKAQEALDF 154>XP_006717990 Length = 175 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKAQEALYF 9 LKAQEAL F Sbjct: 131 LKAQEALDF 139>XP_006717989 Length = 388 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LKAQEALYF 9 LKAQEAL F Sbjct: 131 LKAQEALDF 139>NP_110413 Length = 482 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KAQEALY 8 KA+EALY Sbjct: 78 KAEEALY 84>NP_001155180 Length = 476 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KAQEALY 8 KA+EALY Sbjct: 78 KAEEALY 84>NP_001157849 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LKAQEALYF 9 L AQ+ LYF Sbjct: 74 LGAQDTLYF 82>XP_005264064 Length = 2282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KAQEALYF 9 K QEA YF Sbjct: 1809 KVQEAQYF 1816>XP_005264063 Length = 3136 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KAQEALYF 9 K QEA YF Sbjct: 2663 KVQEAQYF 2670>XP_005264062 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KAQEALYF 9 K QEA YF Sbjct: 2759 KVQEAQYF 2766>XP_005264061 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KAQEALYF 9 K QEA YF Sbjct: 2759 KVQEAQYF 2766>XP_005264059 Length = 3258 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KAQEALYF 9 K QEA YF Sbjct: 2785 KVQEAQYF 2792>NP_001104026 Length = 2647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKAQEALYF 9 LKA E YF Sbjct: 784 LKAHEPTYF 792>NP_001449 Length = 2725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKAQEALYF 9 LKA E YF Sbjct: 779 LKANEPTYF 787>NP_001120959 Length = 2692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKAQEALYF 9 LKA E YF Sbjct: 779 LKANEPTYF 787>NP_001447 Length = 2639 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKAQEALYF 9 LKA E YF Sbjct: 784 LKAHEPTYF 792>NP_001073291 Length = 3118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKAQEALYF 9 LKA + +YF Sbjct: 2462 LKADDKIYF 2470>NP_000417 Length = 3122 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKAQEALYF 9 LKA + +YF Sbjct: 2462 LKADDKIYF 2470>NP_001258779 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKAQEALYF 9 L A+E+LY+ Sbjct: 13 LTAEESLYY 21>NP_001275949 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KAQEALY 8 KAQEAL+ Sbjct: 488 KAQEALH 494>NP_659464 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KAQEALY 8 KAQEAL+ Sbjct: 488 KAQEALH 494>NP_954863 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKAQEALYF 9 L A+E+LY+ Sbjct: 342 LTAEESLYY 350>XP_006715973 Length = 2632 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LKAQEALYF 9 LKA E YF Sbjct: 779 LKANEPTYF 787>XP_005267039 Length = 3206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKAQEALYF 9 LKA + +YF Sbjct: 2550 LKADDKIYF 2558>XP_005267038 Length = 3210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LKAQEALYF 9 LKA + +YF Sbjct: 2550 LKADDKIYF 2558>XP_005248961 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KAQEALY 8 KAQEAL+ Sbjct: 488 KAQEALH 494>NP_570141 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKAQEALYF 9 L A+E+LY+ Sbjct: 265 LTAEESLYY 273>NP_001135440 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LKAQEALYF 9 L A+E+LY+ Sbjct: 231 LTAEESLYY 239>NP_001182156 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KAQEALYF 9 +AQ A+YF Sbjct: 571 RAQMAMYF 578>NP_060106 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KAQEALYF 9 +AQ A+YF Sbjct: 571 RAQMAMYF 578>NP_001161147 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQEALYF 9 AQ+ LYF Sbjct: 69 AQQTLYF 75>NP_001161146 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQEALYF 9 AQ+ LYF Sbjct: 60 AQQTLYF 66>NP_694854 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQEALYF 9 AQ+ LYF Sbjct: 62 AQQTLYF 68>NP_000921 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QEALYF 9 Q+ALYF Sbjct: 98 QQALYF 103>NP_127509 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QEALYF 9 Q+ALYF Sbjct: 52 QQALYF 57>NP_067012 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQEALYF 9 AQ+ LYF Sbjct: 100 AQQTLYF 106>NP_001120645 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQEALYF 9 AQ+ LYF Sbjct: 66 AQQTLYF 72>NP_001164564 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKAQEALY 8 L+AQ++LY Sbjct: 214 LEAQDSLY 221>NP_653236 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKAQEALY 8 L+AQ++LY Sbjct: 299 LEAQDSLY 306>XP_005259075 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KAQEALYF 9 +AQ A+YF Sbjct: 35 RAQMAMYF 42>XP_005259074 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KAQEALYF 9 +AQ A+YF Sbjct: 142 RAQMAMYF 149>XP_006723312 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KAQEALYF 9 +AQ A+YF Sbjct: 486 RAQMAMYF 493>XP_005247172 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKAQEALY 8 L+AQ++LY Sbjct: 214 LEAQDSLY 221>XP_005247171 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKAQEALY 8 L+AQ++LY Sbjct: 214 LEAQDSLY 221>XP_005247170 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LKAQEALY 8 L+AQ++LY Sbjct: 214 LEAQDSLY 221>XP_006713145 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQEALYF 9 AQ+ LYF Sbjct: 60 AQQTLYF 66>XP_006713144 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQEALYF 9 AQ+ LYF Sbjct: 60 AQQTLYF 66Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.137 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 393,549 Number of extensions: 524 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |