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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_002040                                                              17    2528
NP_705895                                                              15    9605
NP_002137                                                              15    9605
XP_005257339                                                           15    9605
XP_005257337                                                           15    9605
XP_006721918                                                           15    9605
XP_005257334                                                           15    9605
XP_006721917                                                           15    9605
XP_005249789                                                           15    9605
XP_005249788                                                           15    9605
XP_006715778                                                           15    9605
XP_005249787                                                           15    9605
XP_005246847                                                           15    9605
XP_006712769                                                           15    9605
XP_006712768                                                           15    9605
XP_006712767                                                           15    9605
XP_006712766                                                           15    9605
XP_005246846                                                           15    9605
NP_005061                                                              15    9605
NP_004875                                                              15    9605
NP_109377                                                              15    9605
NP_963868                                                              15    9605

>NP_002040
          Length = 413

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LIVSKRART 9
           LIVSKRA T
Sbjct: 248 LIVSKRAGT 256



>NP_705895
          Length = 443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 191 SKRART 196



>NP_002137
          Length = 431

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 188 SKRART 193



>XP_005257339
          Length = 299

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  SKRART 9
          SKRART
Sbjct: 56 SKRART 61



>XP_005257337
          Length = 358

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 115 SKRART 120



>XP_006721918
          Length = 431

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 188 SKRART 193



>XP_005257334
          Length = 431

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 188 SKRART 193



>XP_006721917
          Length = 431

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 188 SKRART 193



>XP_005249789
          Length = 443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 191 SKRART 196



>XP_005249788
          Length = 443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 191 SKRART 196



>XP_006715778
          Length = 443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 191 SKRART 196



>XP_005249787
          Length = 443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 191 SKRART 196



>XP_005246847
          Length = 1034

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LIVSKRAR 8
           LIVS++AR
Sbjct: 811 LIVSQKAR 818



>XP_006712769
          Length = 1059

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LIVSKRAR 8
           LIVS++AR
Sbjct: 836 LIVSQKAR 843



>XP_006712768
          Length = 1150

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LIVSKRAR 8
           LIVS++AR
Sbjct: 927 LIVSQKAR 934



>XP_006712767
          Length = 1150

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LIVSKRAR 8
           LIVS++AR
Sbjct: 927 LIVSQKAR 934



>XP_006712766
          Length = 1179

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LIVSKRAR 8
           LIVS++AR
Sbjct: 956 LIVSQKAR 963



>XP_005246846
          Length = 1259

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1    LIVSKRAR 8
            LIVS++AR
Sbjct: 1036 LIVSQKAR 1043



>NP_005061
          Length = 1232

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1    LIVSKRAR 8
            LIVS++AR
Sbjct: 1009 LIVSQKAR 1016



>NP_004875
          Length = 814

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   LIVSKRAR 8
           L+VS++AR
Sbjct: 125 LVVSRKAR 132



>NP_109377
          Length = 443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRART 9
           SKRART
Sbjct: 191 SKRART 196



>NP_963868
          Length = 1259

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1    LIVSKRAR 8
            LIVS++AR
Sbjct: 1036 LIVSQKAR 1043



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.329    0.133    0.315 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 267,923
Number of extensions: 233
Number of successful extensions: 22
Number of sequences better than 10000.0: 22
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 22
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.2 bits)
S2: 28 (15.4 bits)