Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 19 665 NP_057597 17 4312 NP_775934 17 4312 NP_055735 17 4312 NP_001252544 17 4312 XP_006714917 17 4312 XP_006714916 17 4312 XP_006714914 17 4312 XP_006714913 17 4312 XP_006714912 17 4312 XP_006714911 17 4312 XP_006714910 17 4312 XP_006714909 17 4312 XP_006714908 17 4312 XP_006714907 17 4312 XP_006714906 17 4312 XP_006714905 17 4312 XP_006714904 17 4312 XP_005265946 17 4312 XP_005276099 17 4312 NP_004167 16 5631 NP_001005291 16 5631 XP_006721633 16 5631 XP_005256829 16 5631 NP_001077006 16 7355 NP_659427 16 7355 NP_057191 16 7355 NP_001161719 16 7355 NP_001092906 16 7355 NP_001271294 16 7355 NP_001271293 16 7355 NP_001131082 16 7355 NP_478060 16 7355 XP_006726522 16 7355 XP_005276304 16 7355 XP_006724081 16 7355 XP_005261206 16 7355 XP_005261205 16 7355 XP_005254346 16 7355 XP_005254347 16 7355 XP_005273661 16 7355 XP_005273660 16 7355 XP_006716450 16 7355 XP_006716323 16 7355 XP_006716322 16 7355 XP_006716321 16 7355 XP_006716320 16 7355 XP_006716319 16 7355 XP_006716318 16 7355 XP_006714540 16 7355 XP_005248280 16 7355 XP_005270659 16 7355 XP_005270658 16 7355 XP_005270657 16 7355 XP_005270656 16 7355 XP_006710495 16 7355 XP_005270655 16 7355 XP_005270654 16 7355 XP_005270653 16 7355 NP_689776 16 7355 NP_001093123 16 7355 NP_060642 16 7355 NP_005645 15 9605 NP_066285 15 9605 NP_055950 15 9605 NP_001182192 15 9605 NP_001138627 15 9605 NP_001138628 15 9605 NP_001018112 15 9605 NP_001138629 15 9605 NP_005225 15 9605 NP_542391 15 9605 XP_005250749 15 9605 XP_006716239 15 9605 XP_005250292 15 9605 XP_005245422 15 9605 NP_065821 15 9605>NP_003290 Length = 803 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIRDMLQRI 9 LIRDML+RI Sbjct: 693 LIRDMLRRI 701>NP_057597 Length = 632 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIRDMLQ 7 L+RDMLQ Sbjct: 260 LLRDMLQ 266>NP_775934 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 146 LIRDVLQEL 154>NP_055735 Length = 632 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIRDMLQ 7 L+RDMLQ Sbjct: 260 LLRDMLQ 266>NP_001252544 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 146 LIRDVLQEL 154>XP_006714917 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 146 LIRDVLQEL 154>XP_006714916 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 146 LIRDVLQEL 154>XP_006714914 Length = 334 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 170 LIRDVLQEL 178>XP_006714913 Length = 299 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 135 LIRDVLQEL 143>XP_006714912 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 146 LIRDVLQEL 154>XP_006714911 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 146 LIRDVLQEL 154>XP_006714910 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 147 LIRDVLQEL 155>XP_006714909 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 147 LIRDVLQEL 155>XP_006714908 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 147 LIRDVLQEL 155>XP_006714907 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 147 LIRDVLQEL 155>XP_006714906 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 147 LIRDVLQEL 155>XP_006714905 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 175 LIRDVLQEL 183>XP_006714904 Length = 353 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 223 LIRDVLQEL 231>XP_005265946 Length = 387 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 223 LIRDVLQEL 231>XP_005276099 Length = 126 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIRD+LQ + Sbjct: 45 LIRDVLQEL 53>NP_004167 Length = 1147 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIR +LQR+ Sbjct: 631 LIRHLLQRL 639>NP_001005291 Length = 1177 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIR +LQR+ Sbjct: 661 LIRHLLQRL 669>XP_006721633 Length = 1123 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIR +LQR+ Sbjct: 607 LIRHLLQRL 615>XP_005256829 Length = 1145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LIR +LQR+ Sbjct: 629 LIRHLLQRL 637>NP_001077006 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>NP_659427 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>NP_057191 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 ++RD+ QR+ Sbjct: 928 ILRDLCQRV 936>NP_001161719 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>NP_001092906 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDMLQRI 9 RD+LQR+ Sbjct: 287 RDLLQRL 293>NP_001271294 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDMLQRI 9 RD+LQR+ Sbjct: 127 RDLLQRL 133>NP_001271293 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDMLQRI 9 RD+LQR+ Sbjct: 287 RDLLQRL 293>NP_001131082 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>NP_478060 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDMLQRI 9 RD+LQR+ Sbjct: 141 RDLLQRL 147>XP_006726522 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_005276304 Length = 93 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_006724081 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDMLQRI 9 RD+LQR+ Sbjct: 141 RDLLQRL 147>XP_005261206 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDMLQRI 9 RD+LQR+ Sbjct: 141 RDLLQRL 147>XP_005261205 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDMLQRI 9 RD+LQR+ Sbjct: 141 RDLLQRL 147>XP_005254346 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDMLQRI 9 RD+LQR+ Sbjct: 255 RDLLQRL 261>XP_005254347 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDMLQRI 9 RD+LQR+ Sbjct: 255 RDLLQRL 261>XP_005273661 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_005273660 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_006716450 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_006716323 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_006716322 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_006716321 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_006716320 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_006716319 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_006716318 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_006714540 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 ++RD+ QR+ Sbjct: 884 ILRDLCQRV 892>XP_005248280 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>XP_005270659 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>XP_005270658 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>XP_005270657 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>XP_005270656 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>XP_006710495 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>XP_005270655 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>XP_005270654 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>XP_005270653 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+RD L+R+ Sbjct: 66 LLRDTLERL 74>NP_689776 Length = 131 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>NP_001093123 Length = 158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>NP_060642 Length = 165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LIRDMLQR 8 L+RD+LQ+ Sbjct: 46 LLRDILQK 53>NP_005645 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LIRDML 6 LIRDML Sbjct: 402 LIRDML 407>NP_066285 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LIRDML 6 LIRDML Sbjct: 395 LIRDML 400>NP_055950 Length = 2012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 +IRD+LQ + Sbjct: 1310 IIRDILQDV 1318>NP_001182192 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 LI+D+ QR+ Sbjct: 560 LIQDLAQRL 568>NP_001138627 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LIRDML 6 LIRDML Sbjct: 262 LIRDML 267>NP_001138628 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LIRDML 6 LIRDML Sbjct: 242 LIRDML 247>NP_001018112 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 L+R+ LQRI Sbjct: 34 LLRNELQRI 42>NP_001138629 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LIRDML 6 LIRDML Sbjct: 242 LIRDML 247>NP_005225 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LIRDML 6 LIRDML Sbjct: 385 LIRDML 390>NP_542391 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IRDMLQR 8 +RD+LQR Sbjct: 37 LRDVLQR 43>XP_005250749 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IRDMLQR 8 +RD+LQR Sbjct: 37 LRDVLQR 43>XP_006716239 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IRDMLQR 8 +RD+LQR Sbjct: 37 LRDVLQR 43>XP_005250292 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIRDMLQRI 9 +IRD+LQ + Sbjct: 952 IIRDILQDV 960>XP_005245422 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRDMLQRI 9 +RD LQR+ Sbjct: 763 LRDKLQRL 770>NP_065821 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRDMLQRI 9 +RD LQR+ Sbjct: 763 LRDKLQRL 770Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.351 0.162 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,848 Number of extensions: 1156 Number of successful extensions: 77 Number of sequences better than 10000.0: 77 Number of HSP's gapped: 77 Number of HSP's successfully gapped: 77 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |