Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 20 390 NP_001277143 20 390 NP_001077383 20 390 NP_001320 20 390 NP_073713 20 390 XP_005269629 20 390 XP_005269628 20 390 XP_005269627 20 390 XP_005269626 20 390 XP_006717706 20 390 XP_005269625 20 390 XP_005269624 20 390 XP_006717705 20 390 XP_005269622 20 390 XP_005269621 20 390 XP_006717704 20 390 XP_005269619 20 390 XP_005269618 20 390 NP_001319 20 509 NP_001012632 20 509 XP_005272320 20 509 XP_005272319 20 509 XP_005272318 20 509 NP_001263280 18 1135 NP_005600 17 4312 NP_001158188 17 4312 NP_694996 17 4312 NP_116182 17 4312 NP_001265227 17 4312 NP_001129965 17 4312 NP_001274738 17 4312 NP_001274737 17 4312 XP_005271342 17 4312 NP_710156 16 5631 NP_001156372 16 5631 NP_001273330 16 5631 NP_115635 16 5631 NP_001035282 16 5631 NP_060303 16 5631 XP_006725461 16 5631 XP_006724090 16 5631 NP_660359 16 5631 NP_055712 16 7355 NP_001138837 16 7355 NP_660149 16 7355 NP_056330 16 7355 NP_777550 16 7355 NP_001121796 16 7355 NP_001269835 16 7355 NP_001269834 16 7355 NP_002057 16 7355 NP_001269362 16 7355 XP_005277848 16 7355 XP_005257257 16 7355 XP_005257223 16 7355 XP_006721837 16 7355 XP_005271897 16 7355 XP_005265639 16 7355 XP_006713478 16 7355 NP_112597 15 9605 NP_005827 15 9605 NP_001008781 15 9605 XP_005271745 15 9605 XP_005271744 15 9605 XP_005248355 15 9605 NP_114417 15 9605 NP_443732 15 9605 NP_659486 15 9605 NP_872438 15 9605>NP_001277144 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>NP_001277143 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>NP_001077383 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>NP_001320 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>NP_073713 Length = 985 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 792 LINDFTIKQ 800>XP_005269629 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_005269628 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_005269627 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_005269626 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_006717706 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_005269625 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_005269624 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_006717705 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_005269622 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_005269621 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_006717704 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_005269619 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>XP_005269618 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF IKQ Sbjct: 252 LINDFTIKQ 260>NP_001319 Length = 440 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF +KQ Sbjct: 246 LINDFTVKQ 254>NP_001012632 Length = 429 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF +KQ Sbjct: 235 LINDFTVKQ 243>XP_005272320 Length = 430 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF +KQ Sbjct: 235 LINDFTVKQ 243>XP_005272319 Length = 430 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF +KQ Sbjct: 235 LINDFTVKQ 243>XP_005272318 Length = 441 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 LINDF +KQ Sbjct: 246 LINDFTVKQ 254>NP_001263280 Length = 400 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 INDFNIKQ 9 +NDFNIK+ Sbjct: 145 MNDFNIKE 152>NP_005600 Length = 842 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NDFNIK 8 NDFN+K Sbjct: 251 NDFNLK 256>NP_001158188 Length = 754 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NDFNIK 8 NDFN+K Sbjct: 163 NDFNLK 168>NP_694996 Length = 2526 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 ++ND NI++ Sbjct: 1784 IVNDLNIRE 1792>NP_116182 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LINDFNIKQ 9 +I+DF++KQ Sbjct: 409 VIDDFHLKQ 417>NP_001265227 Length = 2614 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LINDFNIKQ 9 ++ND NI++ Sbjct: 1784 IVNDLNIRE 1792>NP_001129965 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LINDFNIKQ 9 +I+DF++KQ Sbjct: 422 VIDDFHLKQ 430>NP_001274738 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LINDFNIKQ 9 +I+DF++KQ Sbjct: 370 VIDDFHLKQ 378>NP_001274737 Length = 374 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LINDFNIKQ 9 +I+DF++KQ Sbjct: 253 VIDDFHLKQ 261>XP_005271342 Length = 528 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LINDFNIKQ 9 +I+DF++KQ Sbjct: 407 VIDDFHLKQ 415>NP_710156 Length = 385 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LINDFNIKQ 9 L+N FN+ Q Sbjct: 191 LVNAFNLSQ 199>NP_001156372 Length = 202 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NDFNIKQ 9 NDF+IK+ Sbjct: 117 NDFDIKE 123>NP_001273330 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NDFNIKQ 9 NDF+IK+ Sbjct: 117 NDFDIKE 123>NP_115635 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LINDFNIK 8 L+N FN+K Sbjct: 481 LMNSFNLK 488>NP_001035282 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 INDFNI 7 INDFN+ Sbjct: 311 INDFNL 316>NP_060303 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 INDFNI 7 INDFN+ Sbjct: 311 INDFNL 316>XP_006725461 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 INDFNI 7 INDFN+ Sbjct: 311 INDFNL 316>XP_006724090 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 INDFNI 7 INDFN+ Sbjct: 311 INDFNL 316>NP_660359 Length = 229 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NDFNIKQ 9 NDF+IK+ Sbjct: 117 NDFDIKE 123>NP_055712 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+KQ Sbjct: 421 DFNMKQ 426>NP_001138837 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+KQ Sbjct: 421 DFNMKQ 426>NP_660149 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+KQ Sbjct: 612 DFNMKQ 617>NP_056330 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INDFNIK 8 ++DFN+K Sbjct: 154 VDDFNLK 160>NP_777550 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INDFNIKQ 9 +ND+NI + Sbjct: 83 LNDYNISE 90>NP_001121796 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INDFNIKQ 9 +ND+NI + Sbjct: 83 LNDYNISE 90>NP_001269835 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INDFNIKQ 9 +ND+NI + Sbjct: 9 LNDYNISE 16>NP_001269834 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INDFNIKQ 9 +ND+NI + Sbjct: 9 LNDYNISE 16>NP_002057 Length = 158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LINDFN 6 +INDFN Sbjct: 36 VINDFN 41>NP_001269362 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INDFNIK 8 ++DFN+K Sbjct: 17 VDDFNLK 23>XP_005277848 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INDFNIK 8 ++DFN+K Sbjct: 17 VDDFNLK 23>XP_005257257 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 INDFNIK 8 ++DFN+K Sbjct: 17 VDDFNLK 23>XP_005257223 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+KQ Sbjct: 241 DFNMKQ 246>XP_006721837 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+KQ Sbjct: 421 DFNMKQ 426>XP_005271897 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INDFNIKQ 9 +ND+NI + Sbjct: 83 LNDYNISE 90>XP_005265639 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+KQ Sbjct: 640 DFNMKQ 645>XP_006713478 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+KQ Sbjct: 672 DFNMKQ 677>NP_112597 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+K+ Sbjct: 144 DFNVKE 149>NP_005827 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 INDFN 6 INDFN Sbjct: 86 INDFN 90>NP_001008781 Length = 4557 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 LINDFN 6 L+ND+N Sbjct: 975 LVNDYN 980>XP_005271745 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+K+ Sbjct: 144 DFNVKE 149>XP_005271744 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 DFNIKQ 9 DFN+K+ Sbjct: 45 DFNVKE 50>XP_005248355 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LINDFNIKQ 9 LINDF+ + Sbjct: 135 LINDFDFPE 143>NP_114417 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LINDFNIK 8 L DFNIK Sbjct: 144 LDKDFNIK 151>NP_443732 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LINDFNIK 8 L DFNIK Sbjct: 144 LDKDFNIK 151>NP_659486 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LINDFNIK 8 ++NDF+I+ Sbjct: 95 VVNDFDIE 102>NP_872438 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LINDFNIKQ 9 LINDF+ + Sbjct: 330 LINDFDFPE 338Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.148 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 479,495 Number of extensions: 764 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |