Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1482 NP_001263689 18 1482 NP_001119584 18 1482 NP_001119586 18 1482 NP_001263625 18 1482 NP_001119590 18 1482 NP_001263690 18 1482 NP_001119585 18 1482 NP_001263624 18 1482 NP_001119588 18 1482 NP_001119587 18 1482 NP_001119589 18 1482 NP_001263627 18 1482 NP_001263628 18 1482 NP_001263626 18 1482 NP_001240658 17 4312 NP_001240657 17 4312 NP_001240656 17 4312 NP_001240659 17 4312 NP_001240662 17 4312 NP_001240661 17 4312 NP_067647 17 4312 NP_112208 17 4312 NP_000224 16 5631 NP_001159530 16 5631 NP_775924 16 5631 NP_000360 16 5631 NP_570718 16 5631 XP_005268094 16 5631 XP_005264366 16 5631 XP_006712078 16 5631 NP_062873 15 9605 NP_062874 15 9605 NP_000863 15 9605>NP_000537 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 251 ILTIITLE 258>NP_001263689 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 212 ILTIITLE 219>NP_001119584 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 251 ILTIITLE 258>NP_001119586 Length = 341 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 251 ILTIITLE 258>NP_001263625 Length = 302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 212 ILTIITLE 219>NP_001119590 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 212 ILTIITLE 219>NP_001263690 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 212 ILTIITLE 219>NP_001119585 Length = 346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 251 ILTIITLE 258>NP_001263624 Length = 307 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 212 ILTIITLE 219>NP_001119588 Length = 209 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 119 ILTIITLE 126>NP_001119587 Length = 261 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 119 ILTIITLE 126>NP_001119589 Length = 214 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 119 ILTIITLE 126>NP_001263627 Length = 182 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 92 ILTIITLE 99>NP_001263628 Length = 187 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 92 ILTIITLE 99>NP_001263626 Length = 234 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ILTIITLE 9 ILTIITLE Sbjct: 92 ILTIITLE 99>NP_001240658 Length = 709 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LILTIITLE 9 L+LT +TLE Sbjct: 453 LLLTFLTLE 461>NP_001240657 Length = 724 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LILTIITLE 9 L+LT +TLE Sbjct: 468 LLLTFLTLE 476>NP_001240656 Length = 784 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LILTIITLE 9 L+LT +TLE Sbjct: 528 LLLTFLTLE 536>NP_001240659 Length = 626 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LILTIITLE 9 L+LT +TLE Sbjct: 370 LLLTFLTLE 378>NP_001240662 Length = 601 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LILTIITLE 9 L+LT +TLE Sbjct: 345 LLLTFLTLE 353>NP_001240661 Length = 625 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LILTIITLE 9 L+LT +TLE Sbjct: 369 LLLTFLTLE 377>NP_067647 Length = 757 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LILTIITLE 9 L+LT +TLE Sbjct: 501 LLLTFLTLE 509>NP_112208 Length = 321 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LILTIITLE 9 LI+TIIT++ Sbjct: 42 LIITIITVD 50>NP_000224 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 457 LTVITLE 463>NP_001159530 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LILTIITLE 9 L+LT +TLE Sbjct: 487 LLLTYLTLE 495>NP_775924 Length = 645 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LILTIITL 8 LILTI+T+ Sbjct: 31 LILTILTI 38>NP_000360 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 512 LTVITLE 518>NP_570718 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LILTIITLE 9 L+LT +TLE Sbjct: 511 LLLTYLTLE 519>XP_005268094 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 512 LTVITLE 518>XP_005264366 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 138 LTVITLE 144>XP_006712078 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 147 LTVITLE 153>NP_062873 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILTIITL 8 ILT+ITL Sbjct: 87 ILTLITL 93>NP_062874 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILTIITL 8 ILT+ITL Sbjct: 87 ILTLITL 93>NP_000863 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILTIITL 8 ILT+ITL Sbjct: 87 ILTLITL 93Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.158 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 371,017 Number of extensions: 582 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |