Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_597677 17 3301 NP_056199 17 3301 XP_005248340 17 3301 XP_005248339 17 3301 XP_005248337 17 3301 XP_006714531 17 3301 XP_006714530 17 3301 NP_001690 17 4312 NP_001265528 17 4312 NP_068713 17 4312 NP_113584 17 4312 NP_001032852 17 4312 XP_005262029 17 4312 XP_005262028 17 4312 XP_005262026 17 4312 XP_006724637 17 4312 XP_005262025 17 4312 XP_005262024 17 4312 XP_005262023 17 4312 XP_005262022 17 4312 XP_006715638 17 4312 XP_005267216 17 4312 NP_115521 17 4312 NP_976241 16 5631 NP_998754 16 5631 XP_005246837 16 5631 XP_005246836 16 5631 XP_006712758 16 5631 XP_005246834 16 5631 NP_663314 16 7355 NP_055271 16 7355 NP_001186421 16 7355 NP_954657 16 7355 NP_000215 16 7355 NP_001171434 16 7355 NP_060839 16 7355 NP_001138680 16 7355 NP_002422 16 7355 XP_005267745 16 7355 XP_005267744 16 7355 XP_006717830 16 7355 XP_005269759 16 7355 NP_008986 15 9605 NP_060873 15 9605 NP_001277134 15 9605 NP_001277133 15 9605 NP_001167448 15 9605 NP_060110 15 9605 NP_061836 15 9605 NP_387505 15 9605 NP_001193856 15 9605 XP_005261051 15 9605 XP_006717660 15 9605 XP_006715203 15 9605 XP_006715202 15 9605 XP_006715201 15 9605 XP_006715200 15 9605 XP_005249275 15 9605 XP_006715199 15 9605 XP_006715067 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIKLMADIC 9 LI+LMADIC Sbjct: 345 LIELMADIC 353>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIKLMADIC 9 LI+LMADIC Sbjct: 345 LIELMADIC 353>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIKLMADIC 9 LI+LMADIC Sbjct: 345 LIELMADIC 353>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIKLMADIC 9 LI+LMADIC Sbjct: 345 LIELMADIC 353>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIKLMADIC 9 LI+LMADIC Sbjct: 345 LIELMADIC 353>NP_597677 Length = 2804 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IK++ DIC Sbjct: 1868 VIKILRDIC 1876>NP_056199 Length = 2697 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IK++ DIC Sbjct: 1868 VIKILRDIC 1876>XP_005248340 Length = 2265 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IK++ DIC Sbjct: 1329 VIKILRDIC 1337>XP_005248339 Length = 2584 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IK++ DIC Sbjct: 1648 VIKILRDIC 1656>XP_005248337 Length = 2698 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IK++ DIC Sbjct: 1868 VIKILRDIC 1876>XP_006714531 Length = 2738 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IK++ DIC Sbjct: 1802 VIKILRDIC 1810>XP_006714530 Length = 2755 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IK++ DIC Sbjct: 1868 VIKILRDIC 1876>NP_001690 Length = 885 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LIKLMADI 8 L+K MADI Sbjct: 640 LVKFMADI 647>NP_001265528 Length = 626 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LIKLMADI 8 L+K MADI Sbjct: 381 LVKFMADI 388>NP_068713 Length = 894 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LIKLMADI 8 L+K MADI Sbjct: 649 LVKFMADI 656>NP_113584 Length = 4374 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 681 IIKLLEEIC 689>NP_001032852 Length = 1125 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 778 IIKLITEIC 786>XP_005262029 Length = 4240 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 681 IIKLLEEIC 689>XP_005262028 Length = 4341 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 681 IIKLLEEIC 689>XP_005262026 Length = 4359 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 681 IIKLLEEIC 689>XP_006724637 Length = 4365 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 681 IIKLLEEIC 689>XP_005262025 Length = 4373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 681 IIKLLEEIC 689>XP_005262024 Length = 4374 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 681 IIKLLEEIC 689>XP_005262023 Length = 4374 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 681 IIKLLEEIC 689>XP_005262022 Length = 4374 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 +IKL+ +IC Sbjct: 681 IIKLLEEIC 689>XP_006715638 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMADIC 9 KLM D+C Sbjct: 641 KLMRDVC 647>XP_005267216 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMADIC 9 KLM D+C Sbjct: 641 KLMRDVC 647>NP_115521 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMADIC 9 KLM D+C Sbjct: 641 KLMRDVC 647>NP_976241 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>NP_998754 Length = 1250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>XP_005246837 Length = 1277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>XP_005246836 Length = 1302 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>XP_006712758 Length = 1302 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>XP_005246834 Length = 1302 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMADIC 9 LMAD+C Sbjct: 89 LMADLC 94>NP_663314 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KLMADIC 9 KL++D+C Sbjct: 210 KLLSDLC 216>NP_055271 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KLMADIC 9 KL++D+C Sbjct: 221 KLLSDLC 227>NP_001186421 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KLMADIC 9 KL++D+C Sbjct: 207 KLLSDLC 213>NP_954657 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LIKLMADI 8 L K+MADI Sbjct: 245 LAKIMADI 252>NP_000215 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LIKLMADI 8 L K+MADI Sbjct: 245 LAKIMADI 252>NP_001171434 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IKLMADIC 9 +KLM ++C Sbjct: 19 LKLMVNVC 26>NP_060839 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 L+++MA IC Sbjct: 330 LMRMMARIC 338>NP_001138680 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 L+++MA IC Sbjct: 330 LMRMMARIC 338>NP_002422 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IKLMADIC 9 +KLM ++C Sbjct: 19 LKLMVNVC 26>XP_005267745 Length = 278 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IKLMADIC 9 +KLM ++C Sbjct: 19 LKLMVNVC 26>XP_005267744 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IKLMADIC 9 +KLM ++C Sbjct: 19 LKLMVNVC 26>XP_006717830 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KLMADIC 9 KL++D+C Sbjct: 35 KLLSDLC 41>XP_005269759 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 KLMADIC 9 KL++D+C Sbjct: 35 KLLSDLC 41>NP_008986 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LIKLMADIC 9 L+K + D+C Sbjct: 875 LVKSLEDLC 883>NP_060873 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LIKLMADI 8 + KLMAD+ Sbjct: 118 IAKLMADV 125>NP_001277134 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LIKLMADI 8 + KLMAD+ Sbjct: 46 IAKLMADV 53>NP_001277133 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LIKLMADI 8 + KLMAD+ Sbjct: 118 IAKLMADV 125>NP_001167448 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IKLMADIC 9 +KL D+C Sbjct: 228 LKLSTDVC 235>NP_060110 Length = 1371 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IKLMADIC 9 +KL D+C Sbjct: 228 LKLSTDVC 235>NP_061836 Length = 2320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLMADI 8 IKLM+D+ Sbjct: 1640 IKLMSDV 1646Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLMADI 8 IKLM+D+ Sbjct: 1939 IKLMSDV 1945>NP_387505 Length = 2269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLMADI 8 IKLM+D+ Sbjct: 1640 IKLMSDV 1646Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLMADI 8 IKLM+D+ Sbjct: 1939 IKLMSDV 1945>NP_001193856 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 L+K ++D+C Sbjct: 924 LLKKISDLC 932>XP_005261051 Length = 2242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLMADI 8 IKLM+D+ Sbjct: 1562 IKLMSDV 1568Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IKLMADI 8 IKLM+D+ Sbjct: 1861 IKLMSDV 1867>XP_006717660 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LIKLMADIC 9 L+K + D+C Sbjct: 854 LVKSLEDLC 862>XP_006715203 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IKLMADIC 9 +KL D+C Sbjct: 228 LKLSTDVC 235>XP_006715202 Length = 966 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IKLMADIC 9 +KL D+C Sbjct: 228 LKLSTDVC 235>XP_006715201 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IKLMADIC 9 +KL D+C Sbjct: 228 LKLSTDVC 235>XP_006715200 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IKLMADIC 9 +KL D+C Sbjct: 228 LKLSTDVC 235>XP_005249275 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IKLMADIC 9 +KL D+C Sbjct: 228 LKLSTDVC 235>XP_006715199 Length = 1425 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 IKLMADIC 9 +KL D+C Sbjct: 228 LKLSTDVC 235>XP_006715067 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LIKLMADIC 9 L+K ++D+C Sbjct: 924 LLKKISDLC 932Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.153 0.474 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 386,042 Number of extensions: 694 Number of successful extensions: 68 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |