Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_689772 19 869 NP_542158 18 1482 NP_001258297 18 1482 NP_000953 18 1482 NP_001258094 18 1482 NP_001258296 18 1482 NP_001258093 18 1482 NP_001258095 18 1482 XP_006717255 18 1482 XP_005252162 18 1482 NP_054831 18 1935 NP_056137 18 1935 NP_001269832 18 1935 NP_001269831 18 1935 XP_005251106 18 1935 XP_006716688 18 1935 XP_006716687 18 1935 NP_005535 17 4312 XP_006712575 17 4312 XP_005246591 17 4312 NP_001275722 16 5631 XP_006720433 16 5631 NP_997204 16 5631 NP_000780 16 7355 NP_076435 16 7355 NP_001245200 15 9605 NP_000240 15 9605 NP_001161089 15 9605 NP_938205 15 9605 NP_001171988 15 9605 NP_078893 15 9605 NP_001127860 15 9605 NP_001127859 15 9605 NP_060576 15 9605 NP_001127861 15 9605 NP_859064 15 9605 NP_803430 15 9605 NP_803429 15 9605 NP_803252 15 9605 NP_783863 15 9605 NP_944489 15 9605 NP_037413 15 9605 XP_005260739 15 9605 XP_005269276 15 9605 XP_006719749 15 9605 XP_005269275 15 9605 XP_006717349 15 9605 XP_005252266 15 9605 XP_005252265 15 9605 XP_005252264 15 9605 XP_006717348 15 9605 XP_006717347 15 9605 XP_006717346 15 9605 XP_005249851 15 9605 XP_005249852 15 9605 XP_005249853 15 9605 XP_006715813 15 9605 XP_005249850 15 9605 XP_005265218 15 9605 XP_005264228 15 9605 XP_005264226 15 9605 XP_006712018 15 9605 XP_005264225 15 9605 XP_005264224 15 9605 XP_005264223 15 9605 NP_001035194 15 9605>NP_689772 Length = 245 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LICLTTKT 8 L+CLTT+T Sbjct: 162 LVCLTTRT 169>NP_542158 Length = 562 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL TKT Sbjct: 529 LVCLNTKT 536>NP_001258297 Length = 537 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL TKT Sbjct: 504 LVCLNTKT 511>NP_000953 Length = 599 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL TKT Sbjct: 566 LVCLNTKT 573>NP_001258094 Length = 490 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL TKT Sbjct: 457 LVCLNTKT 464>NP_001258296 Length = 453 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL TKT Sbjct: 420 LVCLNTKT 427>NP_001258093 Length = 551 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL TKT Sbjct: 518 LVCLNTKT 525>NP_001258095 Length = 453 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL TKT Sbjct: 420 LVCLNTKT 427>XP_006717255 Length = 537 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL TKT Sbjct: 504 LVCLNTKT 511>XP_005252162 Length = 574 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL TKT Sbjct: 541 LVCLNTKT 548>NP_054831 Length = 1294 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CLTTKTA 9 CLTTKT+ Sbjct: 912 CLTTKTS 918>NP_056137 Length = 627 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LICLTTKT 8 L+C++TKT Sbjct: 450 LVCISTKT 457>NP_001269832 Length = 1287 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CLTTKTA 9 CLTTKT+ Sbjct: 905 CLTTKTS 911>NP_001269831 Length = 1285 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CLTTKTA 9 CLTTKT+ Sbjct: 903 CLTTKTS 909>XP_005251106 Length = 1281 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CLTTKTA 9 CLTTKT+ Sbjct: 899 CLTTKTS 905>XP_006716688 Length = 1294 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CLTTKTA 9 CLTTKT+ Sbjct: 912 CLTTKTS 918>XP_006716687 Length = 1294 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CLTTKTA 9 CLTTKT+ Sbjct: 912 CLTTKTS 918>NP_005535 Length = 1242 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ICLTTKT 8 +CLT+KT Sbjct: 185 LCLTSKT 191>XP_006712575 Length = 1242 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ICLTTKT 8 +CLT+KT Sbjct: 185 LCLTSKT 191>XP_005246591 Length = 1242 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ICLTTKT 8 +CLT+KT Sbjct: 185 LCLTSKT 191>NP_001275722 Length = 116 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+CL T+T Sbjct: 8 LLCLDTRT 15>XP_006720433 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 ICLTTKT 8 +C++TKT Sbjct: 377 VCISTKT 383>NP_997204 Length = 480 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 L+C T+KT Sbjct: 375 LLCATSKT 382>NP_000780 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ICLTTKTA 9 +CL KTA Sbjct: 156 VCLPNKTA 163>NP_076435 Length = 131 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CLTTKTA 9 C+TT+T+ Sbjct: 46 CMTTRTS 52>NP_001245200 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ICLTTKTA 9 + +TTKTA Sbjct: 113 VTITTKTA 120>NP_000240 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ICLTTKTA 9 + +TTKTA Sbjct: 113 VTITTKTA 120>NP_001161089 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ICLTTKTA 9 + +TTKTA Sbjct: 15 VTITTKTA 22>NP_938205 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ICLTTKTA 9 +C+ T+TA Sbjct: 495 VCIETETA 502>NP_001171988 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CLTTK 7 CLTTK Sbjct: 417 CLTTK 421>NP_078893 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CLTTK 7 CLTTK Sbjct: 417 CLTTK 421>NP_001127860 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 LIC+ +KT Sbjct: 20 LICVCSKT 27>NP_001127859 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 LIC+ +KT Sbjct: 20 LICVCSKT 27>NP_060576 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 LIC+ +KT Sbjct: 20 LICVCSKT 27>NP_001127861 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 LIC+ +KT Sbjct: 20 LICVCSKT 27>NP_859064 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICLTTK 7 ICL+TK Sbjct: 122 ICLSTK 127>NP_803430 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CLTTKT 8 C+TT+T Sbjct: 46 CMTTRT 51>NP_803429 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CLTTKT 8 C+TT+T Sbjct: 46 CMTTRT 51>NP_803252 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CLTTKT 8 C+TT+T Sbjct: 46 CMTTRT 51>NP_783863 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LICLTTKTA 9 LIC KTA Sbjct: 621 LICSKNKTA 629>NP_944489 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LICLTTKTA 9 LIC KTA Sbjct: 570 LICSKNKTA 578>NP_037413 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ICLTTKTA 9 +C+ T+TA Sbjct: 495 VCIETETA 502>XP_005260739 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ICLTTKTA 9 +C+ T+TA Sbjct: 495 VCIETETA 502>XP_005269276 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LICLTTKTA 9 LIC KTA Sbjct: 518 LICSKNKTA 526>XP_006719749 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LICLTTKTA 9 LIC KTA Sbjct: 570 LICSKNKTA 578>XP_005269275 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LICLTTKTA 9 LIC KTA Sbjct: 621 LICSKNKTA 629>XP_006717349 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CLTTK 7 CLTTK Sbjct: 417 CLTTK 421>XP_005252266 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CLTTK 7 CLTTK Sbjct: 417 CLTTK 421>XP_005252265 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CLTTK 7 CLTTK Sbjct: 417 CLTTK 421>XP_005252264 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CLTTK 7 CLTTK Sbjct: 417 CLTTK 421>XP_006717348 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CLTTK 7 CLTTK Sbjct: 417 CLTTK 421>XP_006717347 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CLTTK 7 CLTTK Sbjct: 417 CLTTK 421>XP_006717346 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 CLTTK 7 CLTTK Sbjct: 417 CLTTK 421>XP_005249851 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 LIC+ +KT Sbjct: 20 LICVCSKT 27>XP_005249852 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 LIC+ +KT Sbjct: 20 LICVCSKT 27>XP_005249853 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 LIC+ +KT Sbjct: 20 LICVCSKT 27>XP_006715813 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 LIC+ +KT Sbjct: 20 LICVCSKT 27>XP_005249850 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LICLTTKT 8 LIC+ +KT Sbjct: 20 LICVCSKT 27>XP_005265218 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ICLTTKTA 9 + +TTKTA Sbjct: 113 VTITTKTA 120>XP_005264228 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICLTTK 7 ICL+TK Sbjct: 63 ICLSTK 68>XP_005264226 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICLTTK 7 ICL+TK Sbjct: 122 ICLSTK 127>XP_006712018 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICLTTK 7 ICL+TK Sbjct: 122 ICLSTK 127>XP_005264225 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICLTTK 7 ICL+TK Sbjct: 122 ICLSTK 127>XP_005264224 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICLTTK 7 ICL+TK Sbjct: 122 ICLSTK 127>XP_005264223 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 ICLTTK 7 ICL+TK Sbjct: 122 ICLSTK 127>NP_001035194 Length = 4493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 ICLTTKT 8 +C+TT+T Sbjct: 4368 LCVTTET 4374Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.131 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 549,613 Number of extensions: 574 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |