Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_958441 19 869 NP_958439 19 869 NP_958440 19 869 NP_005219 19 869 NP_874358 17 2528 NP_598004 17 3301 NP_542407 16 5631 NP_001269042 16 5631 NP_001269041 16 5631 NP_003926 16 5631 XP_006724415 16 5631 XP_005261871 16 5631 XP_005261870 16 5631 XP_006724414 16 5631 XP_005261868 16 5631 XP_006724413 16 5631 XP_006724412 16 5631 XP_006723607 16 5631 XP_005260724 16 5631 NP_001192222 16 7355 NP_001192223 16 7355 NP_000712 16 7355 NP_000709 16 7355 NP_001230741 16 7355 NP_001120694 15 9605 NP_075461 15 9605 NP_001120693 15 9605 NP_000059 15 9605 NP_001167551 15 9605 NP_001129203 15 9605 NP_036411 15 9605 NP_078921 15 9605 NP_071926 15 9605 XP_005273701 15 9605 XP_006716464 15 9605 XP_006716463 15 9605 XP_006716462 15 9605 XP_005265922 15 9605 XP_005265921 15 9605 XP_005265919 15 9605 XP_006714900 15 9605 XP_005265917 15 9605 XP_005268557 15 9605 XP_005268556 15 9605 XP_006714855 15 9605 XP_006714854 15 9605 XP_005268555 15 9605 XP_005268554 15 9605 NP_001004759 15 9605>NP_958441 Length = 705 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIALNTVEQ 9 LIALNTVE+ Sbjct: 90 LIALNTVER 98>NP_958439 Length = 628 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIALNTVEQ 9 LIALNTVE+ Sbjct: 90 LIALNTVER 98>NP_958440 Length = 405 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIALNTVEQ 9 LIALNTVE+ Sbjct: 90 LIALNTVER 98>NP_005219 Length = 1210 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LIALNTVEQ 9 LIALNTVE+ Sbjct: 90 LIALNTVER 98>NP_874358 Length = 631 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LIALNTVEQ 9 L+A+NTV+Q Sbjct: 435 LVAVNTVKQ 443>NP_598004 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IALNTVEQ 9 +ALNTVE+ Sbjct: 277 LALNTVEE 284>NP_542407 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LIALNTVEQ 9 +IALNT+++ Sbjct: 199 VIALNTIKE 207>NP_001269042 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 299 LALNTVE 305>NP_001269041 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 299 LALNTVE 305>NP_003926 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 299 LALNTVE 305>XP_006724415 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 299 LALNTVE 305>XP_005261871 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 299 LALNTVE 305>XP_005261870 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 163 LALNTVE 169>XP_006724414 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 299 LALNTVE 305>XP_005261868 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 299 LALNTVE 305>XP_006724413 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 299 LALNTVE 305>XP_006724412 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IALNTVE 8 +ALNTVE Sbjct: 299 LALNTVE 305>XP_006723607 Length = 447 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LIALNTVEQ 9 +IALNT+++ Sbjct: 199 VIALNTIKE 207>XP_005260724 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LIALNTVEQ 9 +IALNT+++ Sbjct: 199 VIALNTIKE 207>NP_001192222 Length = 2313 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNTV Sbjct: 1487 MIALNTV 1493>NP_001192223 Length = 2251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNTV Sbjct: 1468 MIALNTV 1474>NP_000712 Length = 2270 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNTV Sbjct: 1487 MIALNTV 1493>NP_000709 Length = 2339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNTV Sbjct: 1480 MIALNTV 1486>NP_001230741 Length = 2237 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNTV Sbjct: 1480 MIALNTV 1486>NP_001120694 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNT+ Sbjct: 1574 MIALNTI 1580>NP_075461 Length = 2512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNT+ Sbjct: 1578 MIALNTI 1584>NP_001120693 Length = 2261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNT+ Sbjct: 1575 MIALNTI 1581>NP_000059 Length = 2266 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNT+ Sbjct: 1578 MIALNTI 1584>NP_001167551 Length = 2263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 +IALNT+ Sbjct: 1575 MIALNTI 1581>NP_001129203 Length = 153 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IALNTVEQ 9 ++LN++EQ Sbjct: 129 VSLNSIEQ 136>NP_036411 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IALNTVEQ 9 I LN++EQ Sbjct: 246 IVLNSIEQ 253>NP_078921 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IALNTVEQ 9 ++LN++EQ Sbjct: 205 VSLNSIEQ 212>NP_071926 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALNTVE 8 ALNTVE Sbjct: 148 ALNTVE 153>XP_005273701 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IALNTVEQ 9 ++LN++EQ Sbjct: 159 VSLNSIEQ 166>XP_006716464 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IALNTVEQ 9 ++LN++EQ Sbjct: 159 VSLNSIEQ 166>XP_006716463 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IALNTVEQ 9 ++LN++EQ Sbjct: 210 VSLNSIEQ 217>XP_006716462 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IALNTVEQ 9 ++LN++EQ Sbjct: 210 VSLNSIEQ 217>XP_005265922 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IALNTVEQ 9 I LN++EQ Sbjct: 184 IVLNSIEQ 191>XP_005265921 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IALNTVEQ 9 I LN++EQ Sbjct: 209 IVLNSIEQ 216>XP_005265919 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IALNTVEQ 9 I LN++EQ Sbjct: 262 IVLNSIEQ 269>XP_006714900 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IALNTVEQ 9 I LN++EQ Sbjct: 271 IVLNSIEQ 278>XP_005265917 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IALNTVEQ 9 I LN++EQ Sbjct: 287 IVLNSIEQ 294>XP_005268557 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALNTVE 8 ALNTVE Sbjct: 148 ALNTVE 153>XP_005268556 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALNTVE 8 ALNTVE Sbjct: 70 ALNTVE 75>XP_006714855 Length = 1473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALNTVE 8 ALNTVE Sbjct: 148 ALNTVE 153>XP_006714854 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALNTVE 8 ALNTVE Sbjct: 148 ALNTVE 153>XP_005268555 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALNTVE 8 ALNTVE Sbjct: 148 ALNTVE 153>XP_005268554 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALNTVE 8 ALNTVE Sbjct: 148 ALNTVE 153>NP_001004759 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LIALNTV 7 L+A+NTV Sbjct: 189 LVAINTV 195Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.130 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 298,541 Number of extensions: 285 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |