Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001121619 18 1482 NP_000258 18 1482 NP_001035957 18 1482 XP_006721991 18 1482 XP_006721990 18 1482 XP_006721989 18 1482 XP_005258041 18 1482 XP_006721988 18 1482 XP_006721987 18 1482 XP_006721986 18 1482 XP_005258040 18 1482 XP_006721985 18 1482 NP_689691 18 1935 XP_005258616 18 1935 XP_005258615 18 1935 NP_001153332 18 1935 NP_001153333 18 1935 NP_065810 17 4312 XP_006720684 17 4312 NP_004517 16 5631 NP_055904 16 7355 NP_001161842 16 7355 NP_077720 16 7355 NP_055595 16 7355 NP_037438 16 7355 NP_680086 16 7355 NP_078953 16 7355 XP_006715348 16 7355 XP_005249560 16 7355 XP_006715095 16 7355 XP_006715094 16 7355 XP_006715093 16 7355 XP_006715092 16 7355 NP_079062 15 9605 NP_057015 15 9605 NP_065772 15 9605 NP_001243678 15 9605 NP_001243677 15 9605 XP_006726480 15 9605 XP_005248427 15 9605 XP_005248426 15 9605 XP_006713249 15 9605 XP_005265250 15 9605 XP_005265251 15 9605 NP_036492 15 9605>NP_001121619 Length = 593 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>NP_000258 Length = 2818 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>NP_001035957 Length = 2839 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>XP_006721991 Length = 1632 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>XP_006721990 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>XP_006721989 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>XP_005258041 Length = 2836 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>XP_006721988 Length = 2846 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>XP_006721987 Length = 2849 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>XP_006721986 Length = 2854 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 66 LYLSQLIIL 74>XP_005258040 Length = 2857 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>XP_006721985 Length = 2867 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHLSQLIIL 9 L+LSQLIIL Sbjct: 79 LYLSQLIIL 87>NP_689691 Length = 569 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LHLSQLII 8 +HLSQLII Sbjct: 137 VHLSQLII 144>XP_005258616 Length = 526 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LHLSQLII 8 +HLSQLII Sbjct: 94 VHLSQLII 101>XP_005258615 Length = 570 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LHLSQLII 8 +HLSQLII Sbjct: 138 VHLSQLII 145>NP_001153332 Length = 569 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LHLSQLII 8 +HLSQLII Sbjct: 137 VHLSQLII 144>NP_001153333 Length = 569 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LHLSQLII 8 +HLSQLII Sbjct: 137 VHLSQLII 144>NP_065810 Length = 4700 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LHLSQLI 7 LHLSQL+ Sbjct: 3682 LHLSQLL 3688>XP_006720684 Length = 4713 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LHLSQLI 7 LHLSQL+ Sbjct: 3695 LHLSQLL 3701>NP_004517 Length = 904 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LHLSQLI 7 LHL+QLI Sbjct: 300 LHLNQLI 306>NP_055904 Length = 2517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH+ QL+ L Sbjct: 1888 LHIDQLVCL 1896>NP_001161842 Length = 1782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH+ QL+ L Sbjct: 1667 LHIDQLVCL 1675>NP_077720 Length = 126 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LHLSQLI 7 +HLSQL+ Sbjct: 1 MHLSQLL 7>NP_055595 Length = 1698 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH+ QL+ L Sbjct: 1583 LHIDQLVCL 1591>NP_037438 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHLSQL 6 LHLSQL Sbjct: 335 LHLSQL 340>NP_680086 Length = 256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LHLSQL 6 LHLSQL Sbjct: 249 LHLSQL 254>NP_078953 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 HLSQLIIL 9 HLS LII+ Sbjct: 122 HLSSLIIV 129>XP_006715348 Length = 1734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH+ QL+ L Sbjct: 1619 LHIDQLVCL 1627>XP_005249560 Length = 1750 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH+ QL+ L Sbjct: 1635 LHIDQLVCL 1643>XP_006715095 Length = 2046 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH+ QL+ L Sbjct: 1417 LHIDQLVCL 1425>XP_006715094 Length = 2407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH+ QL+ L Sbjct: 1778 LHIDQLVCL 1786>XP_006715093 Length = 2459 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH+ QL+ L Sbjct: 1830 LHIDQLVCL 1838>XP_006715092 Length = 2490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH+ QL+ L Sbjct: 1861 LHIDQLVCL 1869>NP_079062 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHLSQLII 8 +HL QL+I Sbjct: 249 VHLGQLLI 256>NP_057015 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH QL+I+ Sbjct: 225 LHFIQLVIM 233>NP_065772 Length = 1709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLSQLIIL 9 H SQL++L Sbjct: 123 HASQLLLL 130>NP_001243678 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH QL+I+ Sbjct: 174 LHFIQLVIM 182>NP_001243677 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH QL+I+ Sbjct: 247 LHFIQLVIM 255>XP_006726480 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHLSQLII 8 +HL QL+I Sbjct: 494 VHLGQLLI 501>XP_005248427 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHLSQLII 8 +HL QL+I Sbjct: 73 VHLGQLLI 80>XP_005248426 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHLSQLII 8 +HL QL+I Sbjct: 249 VHLGQLLI 256>XP_006713249 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH QL+I+ Sbjct: 225 LHFIQLVIM 233>XP_005265250 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH QL+I+ Sbjct: 225 LHFIQLVIM 233>XP_005265251 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHLSQLIIL 9 LH QL+I+ Sbjct: 225 LHFIQLVIM 233>NP_036492 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HLSQLIIL 9 HL+++IIL Sbjct: 193 HLNEVIIL 200Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.157 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,059 Number of extensions: 570 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |