Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 21 229 NP_671714 21 229 XP_006715890 21 229 XP_005250160 21 229 XP_005250159 21 229 NP_073739 18 1935 XP_005272109 18 1935 NP_954712 17 2528 XP_006721827 17 2528 XP_006721826 17 2528 XP_006721825 17 2528 NP_079321 17 3301 XP_005261808 17 3301 NP_004578 17 4312 NP_001036041 17 4312 XP_005253668 16 5631 XP_005253667 16 5631 XP_005253666 16 5631 NP_076417 16 5631 NP_002007 16 7355 NP_001273206 16 7355 NP_001273207 16 7355 NP_001273208 16 7355 NP_006313 16 7355 NP_001027545 16 7355 NP_060417 16 7355 XP_005259285 16 7355 XP_006723432 16 7355 XP_006723431 16 7355 XP_005259284 16 7355 XP_006723430 16 7355 XP_005259283 16 7355 XP_005259282 16 7355 XP_005259281 16 7355 XP_005268350 16 7355 NP_060292 16 7355 NP_001027544 16 7355 NP_057460 15 9605 NP_001244928 15 9605 NP_055990 15 9605 NP_001129666 15 9605 NP_001129665 15 9605 NP_055616 15 9605 NP_073752 15 9605 XP_005259280 15 9605 XP_005259279 15 9605 XP_006721607 15 9605 XP_005256736 15 9605 XP_006720709 15 9605 XP_005254660 15 9605 XP_005265050 15 9605 XP_005265049 15 9605 XP_006713135 15 9605 XP_006711879 15 9605 XP_005273329 15 9605 XP_005245194 15 9605 NP_001131141 15 9605 NP_055744 15 9605 NP_037494 15 9605>NP_005742 Length = 3907 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHAQMQSSD 9 LHAQ+QSSD Sbjct: 3322 LHAQLQSSD 3330>NP_671714 Length = 3899 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHAQMQSSD 9 LHAQ+QSSD Sbjct: 3314 LHAQLQSSD 3322>XP_006715890 Length = 3860 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHAQMQSSD 9 LHAQ+QSSD Sbjct: 3275 LHAQLQSSD 3283>XP_005250160 Length = 3939 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHAQMQSSD 9 LHAQ+QSSD Sbjct: 3354 LHAQLQSSD 3362>XP_005250159 Length = 3952 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LHAQMQSSD 9 LHAQ+QSSD Sbjct: 3367 LHAQLQSSD 3375>NP_073739 Length = 1430 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LHAQMQSSD 9 LH+ MQ+SD Sbjct: 661 LHSNMQTSD 669>XP_005272109 Length = 1123 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LHAQMQSSD 9 LH+ MQ+SD Sbjct: 661 LHSNMQTSD 669>NP_954712 Length = 1090 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LHAQMQSS 8 LHAQ+QS+ Sbjct: 741 LHAQLQSA 748>XP_006721827 Length = 887 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LHAQMQSS 8 LHAQ+QS+ Sbjct: 538 LHAQLQSA 545>XP_006721826 Length = 887 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LHAQMQSS 8 LHAQ+QS+ Sbjct: 538 LHAQLQSA 545>XP_006721825 Length = 1071 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LHAQMQSS 8 LHAQ+QS+ Sbjct: 722 LHAQLQSA 729>NP_079321 Length = 529 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LHAQMQS 7 LHAQMQ+ Sbjct: 161 LHAQMQA 167>XP_005261808 Length = 529 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LHAQMQS 7 LHAQMQ+ Sbjct: 161 LHAQMQA 167>NP_004578 Length = 977 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LHAQMQSSD 9 LH+++QSS+ Sbjct: 485 LHSKLQSSE 493>NP_001036041 Length = 977 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LHAQMQSSD 9 LH+++QSS+ Sbjct: 485 LHSKLQSSE 493>XP_005253668 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LHAQMQSSD 9 LH M SSD Sbjct: 317 LHGNMTSSD 325>XP_005253667 Length = 599 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LHAQMQSSD 9 LH M SSD Sbjct: 317 LHGNMTSSD 325>XP_005253666 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LHAQMQSSD 9 LH M SSD Sbjct: 317 LHGNMTSSD 325>NP_076417 Length = 672 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LHAQMQSSD 9 LH M SSD Sbjct: 317 LHGNMTSSD 325>NP_002007 Length = 4061 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HAQMQSSD 9 H Q+QS+D Sbjct: 2008 HHQLQSAD 2015>NP_001273206 Length = 897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH+Q+Q D Sbjct: 332 LHSQLQLED 340>NP_001273207 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH+Q+Q D Sbjct: 342 LHSQLQLED 350>NP_001273208 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH+Q+Q D Sbjct: 342 LHSQLQLED 350>NP_006313 Length = 907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH+Q+Q D Sbjct: 342 LHSQLQLED 350>NP_001027545 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>NP_060417 Length = 888 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+ +SD Sbjct: 750 LHRQLNTSD 758>XP_005259285 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>XP_006723432 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>XP_006723431 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>XP_005259284 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>XP_006723430 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>XP_005259283 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>XP_005259282 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>XP_005259281 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>XP_005268350 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH+Q+Q D Sbjct: 342 LHSQLQLED 350>NP_060292 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LHAQMQSSD 9 LHAQM+ ++ Sbjct: 99 LHAQMKKTN 107>NP_001027544 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 269 LHQQLQSGE 277>NP_057460 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH +Q+SD Sbjct: 876 LHVAVQNSD 884>NP_001244928 Length = 1211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH +Q+SD Sbjct: 917 LHVAVQNSD 925>NP_055990 Length = 2754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LHAQMQS 7 LH Q+QS Sbjct: 2179 LHVQLQS 2185>NP_001129666 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HAQMQSSD 9 H +MQS+D Sbjct: 65 HNRMQSTD 72>NP_001129665 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HAQMQSSD 9 H +MQS+D Sbjct: 65 HNRMQSTD 72>NP_055616 Length = 2137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH ++ SSD Sbjct: 343 LHQEVDSSD 351>NP_073752 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHAQMQSS 8 LH+Q+Q S Sbjct: 835 LHSQIQES 842>XP_005259280 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 82 LHQQLQSRE 90>XP_005259279 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 165 LHQQLQSRE 173>XP_006721607 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH +Q+SD Sbjct: 876 LHVAVQNSD 884>XP_005256736 Length = 1169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH +Q+SD Sbjct: 875 LHVAVQNSD 883>XP_006720709 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHAQMQSS 8 LH+Q+Q S Sbjct: 564 LHSQIQES 571>XP_005254660 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHAQMQSS 8 LH+Q+Q S Sbjct: 835 LHSQIQES 842>XP_005265050 Length = 1578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LHAQMQS 7 LH Q+QS Sbjct: 1003 LHVQLQS 1009>XP_005265049 Length = 2720 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LHAQMQS 7 LH Q+QS Sbjct: 2145 LHVQLQS 2151>XP_006713135 Length = 2727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LHAQMQS 7 LH Q+QS Sbjct: 2152 LHVQLQS 2158>XP_006711879 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH ++ SSD Sbjct: 343 LHQEVDSSD 351>XP_005273329 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH ++ SSD Sbjct: 140 LHQEVDSSD 148>XP_005245194 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHAQMQSS 8 LH +MQ+S Sbjct: 857 LHQEMQNS 864>NP_001131141 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LHAQMQSS 8 LH +MQ+S Sbjct: 822 LHQEMQNS 829>NP_055744 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HAQMQSSD 9 H +MQS+D Sbjct: 65 HNRMQSTD 72>NP_037494 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LHAQMQSSD 9 LH Q+QS + Sbjct: 165 LHQQLQSRE 173Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.109 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,050 Number of extensions: 784 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |