Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 299 XP_005262424 20 299 NP_008986 18 1135 XP_006717660 18 1135 NP_659404 17 4312 NP_001269536 17 4312 NP_694984 17 4312 NP_849157 17 4312 NP_001271226 17 4312 NP_001271227 17 4312 XP_006724792 17 4312 XP_006724701 17 4312 XP_005262172 17 4312 XP_005262170 17 4312 XP_005254507 17 4312 XP_005254506 17 4312 XP_005254505 17 4312 XP_006720635 17 4312 XP_006720634 17 4312 XP_006714159 17 4312 XP_006714158 17 4312 XP_006714157 17 4312 NP_997290 17 4312 NP_004564 17 4312 NP_001005487 17 4312 NP_001185885 16 5631 NP_001185886 16 5631 NP_060912 16 5631 NP_001017977 16 5631 XP_005245390 16 5631 XP_005245389 16 5631 XP_005245388 16 5631 NP_653221 16 7355 NP_001243316 16 7355 NP_001243315 16 7355 NP_001243314 16 7355 NP_005119 16 7355 XP_006724131 16 7355 XP_006712581 16 7355 XP_005246132 16 7355 XP_005270516 16 7355 NP_001073973 16 7355 NP_612411 15 9605 XP_006712922 15 9605 XP_006712921 15 9605 XP_006712920 15 9605 XP_006712919 15 9605 XP_006712918 15 9605 XP_006712917 15 9605>NP_722576 Length = 3080 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGTRMTSNN 9 LGTRMTS+N Sbjct: 1866 LGTRMTSSN 1874>XP_005262424 Length = 2875 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGTRMTSNN 9 LGTRMTS+N Sbjct: 1661 LGTRMTSSN 1669>NP_008986 Length = 1390 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTR TSNN Sbjct: 1243 GTRTTSNN 1250>XP_006717660 Length = 1369 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTR TSNN Sbjct: 1222 GTRTTSNN 1229>NP_659404 Length = 547 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GTRMTSNN 9 G RMTS N Sbjct: 371 GNRMTSTN 378>NP_001269536 Length = 535 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GTRMTSNN 9 G RMTS N Sbjct: 359 GNRMTSTN 366>NP_694984 Length = 1802 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 + T+MT NN Sbjct: 405 MATKMTGNN 413>NP_849157 Length = 1077 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGTRMTSN 8 +GT MTSN Sbjct: 498 VGTMMTSN 505>NP_001271226 Length = 1181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTRM S+N Sbjct: 603 GTRMDSSN 610>NP_001271227 Length = 1170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTRM S+N Sbjct: 607 GTRMDSSN 614>XP_006724792 Length = 411 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GTRMTSNN 9 G RMTS N Sbjct: 235 GNRMTSTN 242>XP_006724701 Length = 1398 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 + T+MT NN Sbjct: 1 MATKMTGNN 9>XP_005262172 Length = 1631 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 + T+MT NN Sbjct: 234 MATKMTGNN 242>XP_005262170 Length = 1752 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 + T+MT NN Sbjct: 405 MATKMTGNN 413>XP_005254507 Length = 1070 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTRM S+N Sbjct: 607 GTRMDSSN 614>XP_005254506 Length = 1123 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTRM S+N Sbjct: 607 GTRMDSSN 614>XP_005254505 Length = 1124 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTRM S+N Sbjct: 607 GTRMDSSN 614>XP_006720635 Length = 1125 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTRM S+N Sbjct: 607 GTRMDSSN 614>XP_006720634 Length = 1184 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTRM S+N Sbjct: 607 GTRMDSSN 614>XP_006714159 Length = 1077 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGTRMTSN 8 +GT MTSN Sbjct: 498 VGTMMTSN 505>XP_006714158 Length = 1077 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGTRMTSN 8 +GT MTSN Sbjct: 498 VGTMMTSN 505>XP_006714157 Length = 1077 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGTRMTSN 8 +GT MTSN Sbjct: 498 VGTMMTSN 505>NP_997290 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 G RMTS+N Sbjct: 187 GIRMTSSN 194>NP_004564 Length = 1185 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 GTRM S+N Sbjct: 607 GTRMDSSN 614>NP_001005487 Length = 307 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 LGT +TS N Sbjct: 79 LGTMLTSEN 87>NP_001185885 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGTRMTSN 8 LGTR T N Sbjct: 224 LGTRATGN 231>NP_001185886 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGTRMTSN 8 LGTR T N Sbjct: 193 LGTRATGN 200>NP_060912 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGTRMTSN 8 LGTR T N Sbjct: 224 LGTRATGN 231>NP_001017977 Length = 860 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGTRMTSN 8 LGTR T N Sbjct: 224 LGTRATGN 231>XP_005245390 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGTRMTSN 8 LGTR T N Sbjct: 224 LGTRATGN 231>XP_005245389 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGTRMTSN 8 LGTR T N Sbjct: 224 LGTRATGN 231>XP_005245388 Length = 937 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGTRMTSN 8 LGTR T N Sbjct: 224 LGTRATGN 231>NP_653221 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 LGT + SNN Sbjct: 247 LGTLVLSNN 255>NP_001243316 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 LGT + SNN Sbjct: 247 LGTLVLSNN 255>NP_001243315 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 LGT + SNN Sbjct: 247 LGTLVLSNN 255>NP_001243314 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 LGT + SNN Sbjct: 247 LGTLVLSNN 255>NP_005119 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GTRMTSNN 9 G+R+TS+N Sbjct: 947 GSRVTSHN 954>XP_006724131 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GTRMTSNN 9 G+R+TS+N Sbjct: 947 GSRVTSHN 954>XP_006712581 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 G R++SNN Sbjct: 912 GNRISSNN 919>XP_005246132 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 G R++SNN Sbjct: 912 GNRISSNN 919>XP_005270516 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGTRMTSNN 9 LGT + SNN Sbjct: 247 LGTLVLSNN 255>NP_001073973 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GTRMTSNN 9 G R++SNN Sbjct: 917 GNRISSNN 924>NP_612411 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LGTRMTSNN 9 +GTR NN Sbjct: 223 MGTRTQKNN 231>XP_006712922 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LGTRMTSNN 9 +GTR NN Sbjct: 240 MGTRTQKNN 248>XP_006712921 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LGTRMTSNN 9 +GTR NN Sbjct: 198 MGTRTQKNN 206>XP_006712920 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LGTRMTSNN 9 +GTR NN Sbjct: 198 MGTRTQKNN 206>XP_006712919 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LGTRMTSNN 9 +GTR NN Sbjct: 223 MGTRTQKNN 231>XP_006712918 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LGTRMTSNN 9 +GTR NN Sbjct: 223 MGTRTQKNN 231>XP_006712917 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LGTRMTSNN 9 +GTR NN Sbjct: 198 MGTRTQKNN 206Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.117 0.311 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 396,855 Number of extensions: 673 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |