Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1482 NP_444254 18 1482 NP_444253 18 1482 NP_444255 18 1482 XP_005247551 18 1482 XP_005247550 18 1482 XP_006713712 18 1482 XP_005247549 18 1482 NP_065789 17 2528 NP_003237 17 4312 NP_443116 17 4312 NP_001128635 17 4312 NP_653267 17 4312 NP_055200 17 4312 NP_149121 17 4312 NP_001164632 17 4312 NP_001164630 17 4312 NP_001164629 17 4312 NP_001164628 17 4312 NP_001164627 17 4312 NP_057627 17 4312 XP_005259426 17 4312 XP_005259424 17 4312 XP_005259423 17 4312 XP_006723203 17 4312 XP_005258534 17 4312 XP_005258533 17 4312 NP_057095 16 5631 NP_001019903 16 5631 NP_001847 16 5631 NP_443729 16 5631 NP_201586 16 5631 XP_005245943 16 5631 XP_006710737 16 5631 XP_005245946 16 5631 XP_005245945 16 5631 XP_005245944 16 5631 XP_005245942 16 5631 XP_005270538 16 5631 NP_000058 16 7355 NP_689865 16 7355 NP_001201838 16 7355 NP_001265454 16 7355 NP_001265453 16 7355 NP_055618 16 7355 NP_001036009 16 7355 NP_001036010 16 7355 NP_003564 16 7355 XP_005276585 16 7355 XP_370934 16 7355 XP_001716413 16 7355 NP_001201835 16 7355 NP_001209 15 9605 NP_996808 15 9605 NP_005398 15 9605 NP_001278376 15 9605 NP_001278375 15 9605 NP_689829 15 9605 NP_001034864 15 9605 NP_001092082 15 9605 NP_001185574 15 9605 NP_001185573 15 9605 NP_477514 15 9605 NP_079130 15 9605 NP_001003818 15 9605 XP_005258568 15 9605 XP_005268040 15 9605 XP_006719216 15 9605 XP_006713671 15 9605 XP_005245975 15 9605 NP_002793 15 9605 NP_001135389 15 9605 NP_789781 15 9605>NP_444256 Length = 1794 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGSQHVVSK 9 LGSQ VVSK Sbjct: 389 LGSQDVVSK 397>NP_444254 Length = 1845 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGSQHVVSK 9 LGSQ VVSK Sbjct: 389 LGSQDVVSK 397>NP_444253 Length = 1914 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGSQHVVSK 9 LGSQ VVSK Sbjct: 389 LGSQDVVSK 397>NP_444255 Length = 1863 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGSQHVVSK 9 LGSQ VVSK Sbjct: 389 LGSQDVVSK 397>XP_005247551 Length = 1855 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGSQHVVSK 9 LGSQ VVSK Sbjct: 399 LGSQDVVSK 407>XP_005247550 Length = 1856 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGSQHVVSK 9 LGSQ VVSK Sbjct: 399 LGSQDVVSK 407>XP_006713712 Length = 1923 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGSQHVVSK 9 LGSQ VVSK Sbjct: 399 LGSQDVVSK 407>XP_005247549 Length = 1924 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGSQHVVSK 9 LGSQ VVSK Sbjct: 399 LGSQDVVSK 407>NP_065789 Length = 1771 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GSQHVVSK 9 GSQH++S+ Sbjct: 1154 GSQHLISR 1161>NP_003237 Length = 1170 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GSQHVVS 8 G QHVVS Sbjct: 136 GKQHVVS 142>NP_443116 Length = 698 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 442 LGSQHV 447>NP_001128635 Length = 602 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 442 LGSQHV 447>NP_653267 Length = 4753 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGSQHVVSK 9 LGS H++ K Sbjct: 1609 LGSPHIIPK 1617>NP_055200 Length = 467 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 326 LGSQHV 331>NP_149121 Length = 697 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 431 LGSQHV 436>NP_001164632 Length = 454 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 283 LGSQHV 288>NP_001164630 Length = 544 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 373 LGSQHV 378>NP_001164629 Length = 554 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 383 LGSQHV 388>NP_001164628 Length = 602 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 431 LGSQHV 436>NP_001164627 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 373 LGSQHV 378>NP_057627 Length = 374 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 233 LGSQHV 238>XP_005259426 Length = 512 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 341 LGSQHV 346>XP_005259424 Length = 549 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 283 LGSQHV 288>XP_005259423 Length = 607 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 341 LGSQHV 346>XP_006723203 Length = 343 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 326 LGSQHV 331>XP_005258534 Length = 479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 466 LGSQHV 471>XP_005258533 Length = 706 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQHV Sbjct: 450 LGSQHV 455>NP_057095 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LG++HV+++ Sbjct: 231 LGAEHVITE 239>NP_001019903 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LG++HV+++ Sbjct: 155 LGAEHVITE 163>NP_001847 Length = 1604 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGSQHVVS 8 +G+QH+VS Sbjct: 563 VGAQHLVS 570>NP_443729 Length = 595 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQH+ Sbjct: 452 LGSQHI 457>NP_201586 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQH+ Sbjct: 334 LGSQHI 339>XP_005245943 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LG++HV+++ Sbjct: 155 LGAEHVITE 163>XP_006710737 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LG++HV+++ Sbjct: 155 LGAEHVITE 163>XP_005245946 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LG++HV+++ Sbjct: 155 LGAEHVITE 163>XP_005245945 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LG++HV+++ Sbjct: 155 LGAEHVITE 163>XP_005245944 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LG++HV+++ Sbjct: 155 LGAEHVITE 163>XP_005245942 Length = 401 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LG++HV+++ Sbjct: 259 LGAEHVITE 267>XP_005270538 Length = 1588 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGSQHVVS 8 +G+QH+VS Sbjct: 563 VGAQHLVS 570>NP_000058 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSQHVVSK 9 GS+H V K Sbjct: 104 GSEHTVDK 111>NP_689865 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LGS++V+S+ Sbjct: 28 LGSENVISQ 36>NP_001201838 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LGS++V+S+ Sbjct: 28 LGSENVISQ 36>NP_001265454 Length = 1483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSQHVVSK 9 G QH+V K Sbjct: 452 GKQHIVLK 459>NP_001265453 Length = 1483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSQHVVSK 9 G QH+V K Sbjct: 452 GKQHIVLK 459>NP_055618 Length = 1483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSQHVVSK 9 G QH+V K Sbjct: 452 GKQHIVLK 459>NP_001036009 Length = 1624 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SQHVVSK 9 SQHV+S+ Sbjct: 398 SQHVISE 404>NP_001036010 Length = 1557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SQHVVSK 9 SQHV+S+ Sbjct: 331 SQHVISE 337>NP_003564 Length = 1587 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SQHVVSK 9 SQHV+S+ Sbjct: 361 SQHVISE 367>XP_005276585 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GSQHVVS 8 G+QHVV+ Sbjct: 494 GAQHVVT 500>XP_370934 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GSQHVVS 8 G+QHVV+ Sbjct: 494 GAQHVVT 500>XP_001716413 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GSQHVVS 8 G+QHVV+ Sbjct: 517 GAQHVVT 523>NP_001201835 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LGSQHVVSK 9 LGS++V+S+ Sbjct: 28 LGSENVISQ 36>NP_001209 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GSQHVVS 8 GS+H VS Sbjct: 130 GSEHTVS 136>NP_996808 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GSQHVVS 8 GS+H VS Sbjct: 130 GSEHTVS 136>NP_005398 Length = 1007 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGSQHVVS 8 LGSQH S Sbjct: 281 LGSQHPFS 288>NP_001278376 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGSQHVVS 8 LGSQH S Sbjct: 144 LGSQHPFS 151>NP_001278375 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGSQHVVS 8 LGSQH S Sbjct: 146 LGSQHPFS 153>NP_689829 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LGSQHVVSK 9 LG+QH+ + Sbjct: 527 LGNQHIYQR 535>NP_001034864 Length = 1661 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GSQHVVSK 9 G QH++S+ Sbjct: 1406 GDQHILSE 1413>NP_001092082 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LGSQHV 6 LGSQH+ Sbjct: 325 LGSQHL 330>NP_001185574 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGSQHVVS 8 LGSQH S Sbjct: 170 LGSQHFSS 177>NP_001185573 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGSQHVVS 8 LGSQH S Sbjct: 170 LGSQHFSS 177>NP_477514 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGSQHVVS 8 LGSQH S Sbjct: 345 LGSQHFSS 352>NP_079130 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSQHVVSK 9 G+QHV K Sbjct: 102 GNQHVYKK 109>NP_001003818 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGSQHVVS 8 LGSQH S Sbjct: 373 LGSQHFSS 380>XP_005258568 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSQHVVSK 9 GSQ +VSK Sbjct: 266 GSQDLVSK 273>XP_005268040 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LGSQHVVS 8 LGSQH S Sbjct: 279 LGSQHPFS 286>XP_006719216 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GSQHVVSK 9 G+QHV K Sbjct: 102 GNQHVYKK 109>XP_006713671 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LGSQHVVSK 9 LG+QH+ + Sbjct: 380 LGNQHIYQR 388>XP_005245975 Length = 1661 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GSQHVVSK 9 G QH++S+ Sbjct: 1406 GDQHILSE 1413>NP_002793 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGSQHVVS 8 +GS+H VS Sbjct: 127 VGSEHYVS 134>NP_001135389 Length = 1335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GSQHVVSK 9 GS H VSK Sbjct: 987 GSAHSVSK 994>NP_789781 Length = 1048 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSQHVVSK 9 GSQ +VSK Sbjct: 266 GSQDLVSK 273Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.123 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 608,424 Number of extensions: 654 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |