Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 869 XP_006716142 19 869 XP_005250088 19 869 XP_006716141 19 869 XP_005250085 19 869 XP_006716140 19 869 XP_005250084 19 869 XP_005250083 19 869 XP_005250082 19 869 NP_937839 17 3301 XP_005247120 17 3301 XP_006713533 17 3301 XP_006713532 17 3301 NP_005807 17 3301 NP_115804 17 4312 NP_002378 17 4312 NP_001078846 17 4312 NP_001009811 17 4312 NP_055799 17 4312 NP_775871 17 4312 XP_006724772 17 4312 XP_005257233 17 4312 XP_005257231 17 4312 XP_005272048 17 4312 XP_006714680 17 4312 NP_055681 16 7355 NP_002307 16 7355 NP_001167617 16 7355 NP_001167618 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_001070865 16 7355 NP_116321 16 7355 NP_892017 16 7355 XP_005258102 16 7355 XP_005266194 16 7355 XP_005266193 16 7355 XP_005266191 16 7355 XP_005266190 16 7355 XP_005266189 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_569157 15 9605 NP_005953 15 9605 NP_001008541 15 9605 NP_001269836 15 9605 NP_001269837 15 9605 NP_001269838 15 9605 NP_006576 15 9605 NP_620636 15 9605 NP_003062 15 9605 NP_002986 15 9605 NP_061728 15 9605 NP_113683 15 9605 XP_005265978 15 9605 XP_005247781 15 9605 NP_113684 15 9605>NP_733751 Length = 4911 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 +GSEISSSR Sbjct: 3437 VGSEISSSR 3445>XP_006716142 Length = 4927 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 +GSEISSSR Sbjct: 3454 VGSEISSSR 3462>XP_005250088 Length = 4928 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 +GSEISSSR Sbjct: 3454 VGSEISSSR 3462>XP_006716141 Length = 4959 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 +GSEISSSR Sbjct: 3454 VGSEISSSR 3462>XP_005250085 Length = 4979 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 +GSEISSSR Sbjct: 3454 VGSEISSSR 3462>XP_006716140 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 +GSEISSSR Sbjct: 3454 VGSEISSSR 3462>XP_005250084 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 +GSEISSSR Sbjct: 3454 VGSEISSSR 3462>XP_005250083 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 +GSEISSSR Sbjct: 3453 VGSEISSSR 3461>XP_005250082 Length = 4983 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 +GSEISSSR Sbjct: 3454 VGSEISSSR 3462>NP_937839 Length = 585 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGSEISS+ Sbjct: 378 LGSEISST 385>XP_005247120 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGSEISS+ Sbjct: 378 LGSEISST 385>XP_006713533 Length = 568 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGSEISS+ Sbjct: 362 LGSEISST 369>XP_006713532 Length = 584 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGSEISS+ Sbjct: 378 LGSEISST 385>NP_005807 Length = 569 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGSEISS+ Sbjct: 362 LGSEISST 369>NP_115804 Length = 1810 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LG+E+SSS Sbjct: 1059 LGAEVSSS 1066>NP_002378 Length = 829 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGSEISS 7 LGSEISS Sbjct: 347 LGSEISS 353>NP_001078846 Length = 1019 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGSEISS 7 LGSEISS Sbjct: 537 LGSEISS 543>NP_001009811 Length = 1044 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGSE+S+S Sbjct: 562 LGSEVSTS 569>NP_055799 Length = 1080 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGSE+S+S Sbjct: 562 LGSEVSTS 569>NP_775871 Length = 8384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LGSEISSSR 9 LGS++SSS+ Sbjct: 7791 LGSQLSSSQ 7799>XP_006724772 Length = 1605 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LG+E+SSS Sbjct: 854 LGAEVSSS 861>XP_005257233 Length = 1046 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGSE+S+S Sbjct: 562 LGSEVSTS 569>XP_005257231 Length = 1080 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGSE+S+S Sbjct: 562 LGSEVSTS 569>XP_005272048 Length = 851 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGSEISS 7 LGSEISS Sbjct: 347 LGSEISS 353>XP_006714680 Length = 1002 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGSEISS 7 LGSEISS Sbjct: 498 LGSEISS 504>NP_055681 Length = 2357 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 GSE+ SSR Sbjct: 2274 GSELPSSR 2281>NP_002307 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGSEISSSR 9 LG E+ SSR Sbjct: 293 LGQEVLSSR 301>NP_001167617 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGSEISSSR 9 LG E+ SSR Sbjct: 304 LGQEVLSSR 312>NP_001167618 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGSEISSSR 9 LG E+ SSR Sbjct: 293 LGQEVLSSR 301>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 G+EISS R Sbjct: 8646 GNEISSGR 8653>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 G+EISS R Sbjct: 7719 GNEISSGR 7726>NP_001070865 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGSEISSSR 9 LGS+ SSR Sbjct: 129 LGSDFGSSR 137>NP_116321 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGSEISSS 8 LGS +SSS Sbjct: 246 LGSSVSSS 253>NP_892017 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGSEISSSR 9 LGS+ SSR Sbjct: 129 LGSDFGSSR 137>XP_005258102 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGSEISSS 8 LGS +SSS Sbjct: 216 LGSSVSSS 223>XP_005266194 Length = 2379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 GSE+ SSR Sbjct: 2296 GSELPSSR 2303>XP_005266193 Length = 2248 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 GSE+ SSR Sbjct: 2185 GSELPSSR 2192>XP_005266191 Length = 2379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 GSE+ SSR Sbjct: 2296 GSELPSSR 2303>XP_005266190 Length = 2485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 GSE+ SSR Sbjct: 2422 GSELPSSR 2429>XP_005266189 Length = 2505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 GSE+ SSR Sbjct: 2422 GSELPSSR 2429>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 G+EISS R Sbjct: 8647 GNEISSGR 8654>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 G+EISS R Sbjct: 8647 GNEISSGR 8654>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 G+EISS R Sbjct: 8963 GNEISSGR 8970>NP_569157 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGSEISSSR 9 +GS ISS R Sbjct: 228 IGSTISSDR 236>NP_005953 Length = 228 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGSEISSSR 9 +GS ISS R Sbjct: 161 IGSTISSDR 169>NP_001008541 Length = 182 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGSEISSSR 9 +GS ISS R Sbjct: 115 IGSTISSDR 123>NP_001269836 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LGSEISSS 8 LGS ISSS Sbjct: 189 LGSGISSS 196>NP_001269837 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LGSEISSS 8 LGS ISSS Sbjct: 157 LGSGISSS 164>NP_001269838 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LGSEISSS 8 LGS ISSS Sbjct: 135 LGSGISSS 142>NP_006576 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LGSEISSS 8 LGS ISSS Sbjct: 208 LGSGISSS 215>NP_620636 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SEISSSR 9 SE+SSSR Sbjct: 378 SELSSSR 384>NP_003062 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SEISSSR 9 SE+SSSR Sbjct: 378 SELSSSR 384>NP_002986 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGSEISSSR 9 +GSE+S R Sbjct: 22 VGSEVSDKR 30>NP_061728 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGS++SS+ Sbjct: 281 LGSDVSST 288>NP_113683 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGS++SS+ Sbjct: 281 LGSDVSST 288>XP_005265978 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSEISSSR 9 GSE +SSR Sbjct: 19 GSEAASSR 26>XP_005247781 Length = 1008 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SEISSSR 9 SE+SSSR Sbjct: 378 SELSSSR 384>NP_113684 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGSEISSS 8 LGS++SS+ Sbjct: 281 LGSDVSST 288Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.113 0.253 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 462,923 Number of extensions: 701 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |