Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_073713 19 665 NP_002429 18 1935 NP_001275949 17 2528 NP_659464 17 2528 XP_005248961 17 2528 NP_056285 17 3301 NP_663788 17 3301 NP_001106984 17 3301 NP_001106983 17 3301 XP_006720022 17 3301 XP_005254151 17 3301 XP_005254150 17 3301 XP_006720021 17 3301 XP_005254149 17 3301 XP_005254146 17 3301 XP_006720020 17 3301 XP_005254145 17 3301 XP_005254143 17 3301 XP_005254142 17 3301 XP_005264310 17 3301 XP_005264309 17 3301 XP_005264308 17 3301 XP_006712048 17 3301 NP_116107 17 4312 XP_005264089 17 4312 NP_116205 16 5631 XP_005259403 16 5631 XP_005259401 16 5631 NP_001138571 16 7355 NP_060055 16 7355 NP_060700 16 7355 NP_115627 15 9605 NP_001138600 15 9605 NP_000947 15 9605 NP_001269633 15 9605 NP_001269634 15 9605 NP_038476 15 9605 NP_002883 15 9605 NP_075377 15 9605 NP_075376 15 9605 NP_003386 15 9605 NP_872589 15 9605 XP_006723602 15 9605 XP_005260717 15 9605 XP_005268022 15 9605 XP_005268021 15 9605 XP_006718995 15 9605 XP_006718993 15 9605 XP_005274424 15 9605 XP_005274423 15 9605 XP_006718583 15 9605 XP_006718582 15 9605 XP_006717419 15 9605 XP_006715439 15 9605 XP_005270437 15 9605 NP_006408 15 9605 NP_115828 15 9605 NP_001139500 15 9605 NP_203753 15 9605 NP_542789 15 9605>NP_073713 Length = 985 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGRRSSLMY 9 LGRRSSL Y Sbjct: 35 LGRRSSLTY 43>NP_002429 Length = 1456 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GRRSSLMY 9 GRRSSL Y Sbjct: 1040 GRRSSLSY 1047>NP_001275949 Length = 797 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LGRRSSLMY 9 LG+RSSL++ Sbjct: 537 LGKRSSLLH 545>NP_659464 Length = 814 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LGRRSSLMY 9 LG+RSSL++ Sbjct: 537 LGKRSSLLH 545>XP_005248961 Length = 842 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LGRRSSLMY 9 LG+RSSL++ Sbjct: 537 LGKRSSLLH 545>NP_056285 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 477 LGRRSSL 483>NP_663788 Length = 782 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 735 LGRRSSL 741>NP_001106984 Length = 753 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 706 LGRRSSL 712>NP_001106983 Length = 803 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 756 LGRRSSL 762>XP_006720022 Length = 717 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 590 LGRRSSL 596>XP_005254151 Length = 717 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 590 LGRRSSL 596>XP_005254150 Length = 717 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 590 LGRRSSL 596>XP_006720021 Length = 717 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 590 LGRRSSL 596>XP_005254149 Length = 717 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 590 LGRRSSL 596>XP_005254146 Length = 792 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 665 LGRRSSL 671>XP_006720020 Length = 798 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 671 LGRRSSL 677>XP_005254145 Length = 802 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 675 LGRRSSL 681>XP_005254143 Length = 862 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 735 LGRRSSL 741>XP_005254142 Length = 874 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 747 LGRRSSL 753>XP_005264310 Length = 531 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 477 LGRRSSL 483>XP_005264309 Length = 1324 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 477 LGRRSSL 483>XP_005264308 Length = 1218 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 477 LGRRSSL 483>XP_006712048 Length = 1249 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 LGRRSSL Sbjct: 477 LGRRSSL 483>NP_116107 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LGRRSSLM 8 +GRRSSL+ Sbjct: 106 VGRRSSLL 113>XP_005264089 Length = 413 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LGRRSSLM 8 +GRRSSL+ Sbjct: 45 VGRRSSLL 52>NP_116205 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 +GRRSSL Sbjct: 109 MGRRSSL 115>XP_005259403 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 +GRRSSL Sbjct: 109 MGRRSSL 115>XP_005259401 Length = 759 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 +GRRSSL Sbjct: 109 MGRRSSL 115>NP_001138571 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LGRRSSLMY 9 LGR+ S+M+ Sbjct: 106 LGRKLSIMF 114>NP_060055 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LGRRSSLMY 9 LGR+ S+M+ Sbjct: 106 LGRKLSIMF 114>NP_060700 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGRRSSL 7 +GRRSSL Sbjct: 52 VGRRSSL 58>NP_115627 Length = 1476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 593 GRRSSL 598>NP_001138600 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRSSLMY 9 RRS+L+Y Sbjct: 1832 RRSALLY 1838>NP_000947 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 59 GRRSSL 64>NP_001269633 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGRRSSLMY 9 L R+S +MY Sbjct: 41 LSRKSPIMY 49>NP_001269634 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGRRSSLMY 9 L R+S +MY Sbjct: 37 LSRKSPIMY 45>NP_038476 Length = 1556 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 1421 LGRRSS 1426>NP_002883 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 143 GRRSSL 148>NP_075377 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 143 GRRSSL 148>NP_075376 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 143 GRRSSL 148>NP_003386 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 183 LGRRSS 188>NP_872589 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 1389 LGRRSS 1394>XP_006723602 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 56 LGRRSS 61>XP_005260717 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 56 LGRRSS 61>XP_005268022 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 143 GRRSSL 148>XP_005268021 Length = 1277 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 143 GRRSSL 148>XP_006718995 Length = 2382 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 1605 LGRRSS 1610>XP_006718993 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 1825 LGRRSS 1830>XP_005274424 Length = 2614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 1838 LGRRSS 1843>XP_005274423 Length = 2615 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 1838 LGRRSS 1843>XP_006718583 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 515 GRRSSL 520>XP_006718582 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 593 GRRSSL 598>XP_006717419 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 284 GRRSSL 289>XP_006715439 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRSSLMY 9 RRS+L+Y Sbjct: 1832 RRSALLY 1838>XP_005270437 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRRSSLMY 9 G+R SL+Y Sbjct: 21 GKRLSLLY 28>NP_006408 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRRSSLMY 9 G+R SL+Y Sbjct: 21 GKRLSLLY 28>NP_115828 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 232 GRRSSL 237>NP_001139500 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GRRSSL 7 GRRSSL Sbjct: 232 GRRSSL 237>NP_203753 Length = 2601 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 1825 LGRRSS 1830>NP_542789 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRRSS 6 LGRRSS Sbjct: 31 LGRRSS 36Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.140 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 350,518 Number of extensions: 366 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |