Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 20 509 NP_055192 18 1482 NP_001123359 18 1482 NP_694985 17 2528 NP_006738 17 2528 XP_005274246 17 2528 XP_005263371 17 4312 NP_001268421 16 5631 NP_004509 16 5631 NP_000525 16 5631 NP_742106 16 5631 NP_001121615 16 5631 NP_001121616 16 5631 NP_000170 16 5631 NP_742105 16 5631 NP_742104 16 5631 NP_001268422 16 5631 NP_001268423 16 5631 XP_006723855 16 5631 XP_006723854 16 5631 XP_006723853 16 5631 XP_006723852 16 5631 XP_006723851 16 5631 XP_006723850 16 5631 XP_005246706 16 5631 XP_005246704 16 5631 XP_005264328 16 5631 NP_005637 16 7355 NP_937872 16 7355 NP_060380 16 7355 XP_006713969 16 7355 XP_006713968 16 7355 XP_005264451 16 7355 XP_006712100 16 7355 XP_005264450 16 7355 XP_006711875 16 7355 XP_005273291 16 7355 NP_002917 16 7355 NP_001120669 15 9605 NP_001412 15 9605 NP_001070650 15 9605 NP_036550 15 9605 NP_003122 15 9605 NP_006178 15 9605 NP_001099001 15 9605 NP_065870 15 9605 NP_001156001 15 9605 XP_005262446 15 9605 XP_005257253 15 9605 XP_005257252 15 9605 XP_005253946 15 9605 XP_006715718 15 9605 XP_005248808 15 9605 XP_005248807 15 9605 XP_005248806 15 9605 XP_005248805 15 9605 XP_005248804 15 9605 XP_005248803 15 9605 XP_005248802 15 9605 XP_005248801 15 9605 XP_005248800 15 9605>NP_003290 Length = 803 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGRGTAITL 9 LGRGT ITL Sbjct: 241 LGRGTTITL 249>NP_055192 Length = 621 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GRGTAIT 8 GRGTAIT Sbjct: 10 GRGTAIT 16>NP_001123359 Length = 568 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GRGTAIT 8 GRGTAIT Sbjct: 10 GRGTAIT 16>NP_694985 Length = 1042 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GRGTAITL 9 GRG AITL Sbjct: 652 GRGEAITL 659>NP_006738 Length = 1042 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GRGTAITL 9 GRG AITL Sbjct: 652 GRGEAITL 659>XP_005274246 Length = 1042 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GRGTAITL 9 GRG AITL Sbjct: 652 GRGEAITL 659>XP_005263371 Length = 526 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGRGTAITL 9 LG GTA+ L Sbjct: 70 LGTGTAVAL 78>NP_001268421 Length = 1230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRGTA 6 LGRGTA Sbjct: 1085 LGRGTA 1090>NP_004509 Length = 844 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 565 VGRGPAIT 572>NP_000525 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 LG+GT +T Sbjct: 137 LGQGTTVT 144>NP_742106 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 562 VGRGPAIT 569>NP_001121615 Length = 893 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 LG+GT +T Sbjct: 137 LGQGTTVT 144>NP_001121616 Length = 770 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 LG+GT +T Sbjct: 137 LGQGTTVT 144>NP_000170 Length = 1360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRGTA 6 LGRGTA Sbjct: 1215 LGRGTA 1220>NP_742105 Length = 872 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 593 VGRGPAIT 600>NP_742104 Length = 854 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 575 VGRGPAIT 582>NP_001268422 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRGTA 6 LGRGTA Sbjct: 913 LGRGTA 918>NP_001268423 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRGTA 6 LGRGTA Sbjct: 913 LGRGTA 918>XP_006723855 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 577 VGRGPAIT 584>XP_006723854 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 579 VGRGPAIT 586>XP_006723853 Length = 868 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 589 VGRGPAIT 596>XP_006723852 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 597 VGRGPAIT 604>XP_006723851 Length = 885 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 606 VGRGPAIT 613>XP_006723850 Length = 886 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 +GRG AIT Sbjct: 607 VGRGPAIT 614>XP_005246706 Length = 891 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 LG+GT +T Sbjct: 137 LGQGTTVT 144>XP_005246704 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGRGTAIT 8 LG+GT +T Sbjct: 137 LGQGTTVT 144>XP_005264328 Length = 1261 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGRGTA 6 LGRGTA Sbjct: 1116 LGRGTA 1121>NP_005637 Length = 1621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGRGTAI 7 LGRGT++ Sbjct: 565 LGRGTSL 571>NP_937872 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GRGTAIT 8 GRGT +T Sbjct: 632 GRGTGLT 638>NP_060380 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RGTAIT 8 RGTAIT Sbjct: 225 RGTAIT 230>XP_006713969 Length = 1157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GRGTAIT 8 GRGT +T Sbjct: 632 GRGTGLT 638>XP_006713968 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GRGTAIT 8 GRGT +T Sbjct: 632 GRGTGLT 638>XP_005264451 Length = 240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RGTAIT 8 RGTAIT Sbjct: 225 RGTAIT 230>XP_006712100 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RGTAIT 8 RGTAIT Sbjct: 225 RGTAIT 230>XP_005264450 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RGTAIT 8 RGTAIT Sbjct: 225 RGTAIT 230>XP_006711875 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGRGTAI 7 LGRGT++ Sbjct: 109 LGRGTSL 115>XP_005273291 Length = 1620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGRGTAI 7 LGRGT++ Sbjct: 565 LGRGTSL 571>NP_002917 Length = 1376 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GRGTAIT 8 GRGT +T Sbjct: 632 GRGTGLT 638>NP_001120669 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LGRGTAITL 9 +G G+A+TL Sbjct: 411 VGSGSALTL 419>NP_001412 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LGRGTAITL 9 +G G+A+TL Sbjct: 411 VGSGSALTL 419>NP_001070650 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRGTAITL 9 G+GTA+ L Sbjct: 53 GQGTAVLL 60>NP_036550 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRGTAITL 9 G+GTA+ L Sbjct: 53 GQGTAVLL 60>NP_003122 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGRGTAI 7 LGRG+A+ Sbjct: 12 LGRGSAL 18>NP_006178 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GRGTAI 7 GRGTA+ Sbjct: 64 GRGTAL 69>NP_001099001 Length = 1319 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 766 GTAITL 771>NP_065870 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 749 GTAITL 754>NP_001156001 Length = 1515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 962 GTAITL 967>XP_005262446 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LGRGTAITL 9 +G G+A+TL Sbjct: 411 VGSGSALTL 419>XP_005257253 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRGTAITL 9 G+GTA+ L Sbjct: 53 GQGTAVLL 60>XP_005257252 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRGTAITL 9 G+GTA+ L Sbjct: 53 GQGTAVLL 60>XP_005253946 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GRGTAI 7 GRGTA+ Sbjct: 64 GRGTAL 69>XP_006715718 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GRGTAIT 8 G GTA+T Sbjct: 181 GHGTALT 187>XP_005248808 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 568 GTAITL 573>XP_005248807 Length = 1182 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 629 GTAITL 634>XP_005248806 Length = 1317 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 764 GTAITL 769>XP_005248805 Length = 1345 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 792 GTAITL 797>XP_005248804 Length = 1378 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 825 GTAITL 830>XP_005248803 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 902 GTAITL 907>XP_005248802 Length = 1515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 962 GTAITL 967>XP_005248801 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 988 GTAITL 993>XP_005248800 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTAITL 9 GTAITL Sbjct: 988 GTAITL 993Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.145 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 540,754 Number of extensions: 784 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |