Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 390 NP_001091680 20 390 NP_001091679 20 390 XP_006713048 20 390 XP_006713047 20 390 XP_006713046 20 390 XP_005264943 20 390 XP_006720914 17 2528 NP_631909 17 2528 NP_000177 17 3301 NP_001014975 17 3301 XP_006711346 17 3301 XP_006711345 17 3301 NP_115642 17 4312 NP_005468 16 5631 NP_001278236 16 5631 NP_001243469 16 5631 NP_001243468 16 5631 NP_057475 16 5631 NP_001278235 16 5631 NP_001278237 16 5631 NP_055642 16 5631 NP_002421 16 5631 XP_005250112 16 5631 XP_006716197 16 5631 XP_006716196 16 5631 XP_006711736 16 5631 XP_005245701 16 5631 XP_005245700 16 5631 NP_036388 16 5631 NP_002105 16 7355 NP_001128119 16 7355 NP_940997 16 7355 XP_005276585 16 7355 XP_370934 16 7355 XP_005249099 16 7355 XP_006713972 16 7355 XP_006713971 16 7355 XP_001716413 16 7355 NP_079317 16 7355 NP_061871 15 9605 NP_000284 15 9605 NP_001027005 15 9605 NP_004371 15 9605 NP_001073315 15 9605 NP_056477 15 9605 NP_068741 15 9605 NP_208384 15 9605 NP_001032412 15 9605 NP_065933 15 9605 NP_001161686 15 9605 XP_005256041 15 9605 XP_005256040 15 9605 XP_005255182 15 9605 XP_006720911 15 9605 XP_005255181 15 9605 XP_005266147 15 9605 XP_005266146 15 9605 XP_005248944 15 9605 XP_005248943 15 9605 XP_005248942 15 9605 XP_006712050 15 9605 XP_005264311 15 9605 XP_006712049 15 9605>NP_001895 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGMAMEPDR 9 L MAMEPDR Sbjct: 10 LDMAMEPDR 18>NP_001091680 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGMAMEPDR 9 L MAMEPDR Sbjct: 10 LDMAMEPDR 18>NP_001091679 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGMAMEPDR 9 L MAMEPDR Sbjct: 10 LDMAMEPDR 18>XP_006713048 Length = 720 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGMAMEPDR 9 L MAMEPDR Sbjct: 10 LDMAMEPDR 18>XP_006713047 Length = 774 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGMAMEPDR 9 L MAMEPDR Sbjct: 3 LDMAMEPDR 11>XP_006713046 Length = 774 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGMAMEPDR 9 L MAMEPDR Sbjct: 3 LDMAMEPDR 11>XP_005264943 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LGMAMEPDR 9 L MAMEPDR Sbjct: 10 LDMAMEPDR 18>XP_006720914 Length = 543 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LGMAMEPDR 9 LGMA EP R Sbjct: 160 LGMAEEPPR 168>NP_631909 Length = 520 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LGMAMEPDR 9 LGMA EP R Sbjct: 137 LGMAEEPPR 145>NP_000177 Length = 1231 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AMEPDR 9 AMEPDR Sbjct: 161 AMEPDR 166>NP_001014975 Length = 449 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AMEPDR 9 AMEPDR Sbjct: 161 AMEPDR 166>XP_006711346 Length = 819 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AMEPDR 9 AMEPDR Sbjct: 161 AMEPDR 166>XP_006711345 Length = 1173 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AMEPDR 9 AMEPDR Sbjct: 161 AMEPDR 166>NP_115642 Length = 1984 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LGM ++PD Sbjct: 193 LGMLLQPD 200>NP_005468 Length = 1203 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMAMEPDR 9 G+A EP+R Sbjct: 147 GLAAEPER 154>NP_001278236 Length = 138 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGMAMEPDR 9 +G+A++P+R Sbjct: 56 MGLAVDPNR 64>NP_001243469 Length = 231 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGMAMEPDR 9 +G+A++P+R Sbjct: 56 MGLAVDPNR 64>NP_001243468 Length = 232 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGMAMEPDR 9 +G+A++P+R Sbjct: 56 MGLAVDPNR 64>NP_057475 Length = 178 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGMAMEPDR 9 +G+A++P+R Sbjct: 56 MGLAVDPNR 64>NP_001278235 Length = 142 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGMAMEPDR 9 +G+A++P+R Sbjct: 56 MGLAVDPNR 64>NP_001278237 Length = 99 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LGMAMEPDR 9 +G+A++P+R Sbjct: 56 MGLAVDPNR 64>NP_055642 Length = 810 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LGM+ +PD Sbjct: 335 LGMSADPD 342>NP_002421 Length = 1320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LGMAMEP 7 LGM MEP Sbjct: 61 LGMNMEP 67>XP_005250112 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMAMEPDR 9 G+A+EP R Sbjct: 429 GLALEPGR 436>XP_006716197 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMAMEPDR 9 G+A+EP R Sbjct: 488 GLALEPGR 495>XP_006716196 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMAMEPDR 9 G+A+EP R Sbjct: 489 GLALEPGR 496>XP_006711736 Length = 810 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LGM+ +PD Sbjct: 335 LGMSADPD 342>XP_005245701 Length = 810 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LGM+ +PD Sbjct: 335 LGMSADPD 342>XP_005245700 Length = 810 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LGM+ +PD Sbjct: 335 LGMSADPD 342>NP_036388 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMAMEPDR 9 G+A+EP R Sbjct: 483 GLALEPGR 490>NP_002105 Length = 2718 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LG+ ++PD Sbjct: 462 LGLVLQPD 469>NP_001128119 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGMAMEP 7 LG+A+EP Sbjct: 737 LGLAIEP 743>NP_940997 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGMAMEP 7 LG+A+EP Sbjct: 653 LGLAIEP 659>XP_005276585 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LG+A +PD Sbjct: 85 LGLAPDPD 92>XP_370934 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LG+A +PD Sbjct: 85 LGLAPDPD 92>XP_005249099 Length = 2026 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LG+ ++PD Sbjct: 462 LGLVLQPD 469>XP_006713972 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGMAMEP 7 LG+A+EP Sbjct: 674 LGLAIEP 680>XP_006713971 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGMAMEP 7 LG+A+EP Sbjct: 758 LGLAIEP 764>XP_001716413 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 LG+A +PD Sbjct: 85 LGLAPDPD 92>NP_079317 Length = 165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GMAMEP 7 GMA+EP Sbjct: 43 GMALEP 48>NP_061871 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 LGMAMEPD 8 +GM + PD Sbjct: 406 IGMGLSPD 413>NP_000284 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGMAMEPDR 9 LG++ PDR Sbjct: 547 LGLSGRPDR 555>NP_001027005 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGMAMEPDR 9 LG++ PDR Sbjct: 540 LGLSGRPDR 548>NP_004371 Length = 2442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GMAMEPDR 9 GMA+ P R Sbjct: 761 GMAISPSR 768>NP_001073315 Length = 2404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GMAMEPDR 9 GMA+ P R Sbjct: 723 GMAISPSR 730>NP_056477 Length = 1749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 GMAMEPD 8 GMA PD Sbjct: 71 GMAFSPD 77>NP_068741 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 L MA+EP+ Sbjct: 512 LAMALEPN 519>NP_208384 Length = 2080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GMAMEPD 8 GMA EP+ Sbjct: 1794 GMATEPE 1800>NP_001032412 Length = 2649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GMAMEPD 8 GMA EP+ Sbjct: 2363 GMATEPE 2369>NP_065933 Length = 1284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GMAMEP 7 G+AMEP Sbjct: 861 GVAMEP 866>NP_001161686 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GMAMEPD 8 G+A EPD Sbjct: 232 GVAAEPD 238>XP_005256041 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGMAMEPDR 9 LG++ PDR Sbjct: 540 LGLSGRPDR 548>XP_005256040 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGMAMEPDR 9 LG++ PDR Sbjct: 547 LGLSGRPDR 555>XP_005255182 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GMAMEPDR 9 GMA+ P R Sbjct: 761 GMAISPSR 768>XP_006720911 Length = 2355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GMAMEPDR 9 GMA+ P R Sbjct: 761 GMAISPSR 768>XP_005255181 Length = 2427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GMAMEPDR 9 GMA+ P R Sbjct: 746 GMAISPSR 753>XP_005266147 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 LGMAMEPD 8 +GM + PD Sbjct: 498 IGMGLSPD 505>XP_005266146 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 LGMAMEPD 8 +GM + PD Sbjct: 508 IGMGLSPD 515>XP_005248944 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 L MA+EP+ Sbjct: 470 LAMALEPN 477>XP_005248943 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 L MA+EP+ Sbjct: 489 LAMALEPN 496>XP_005248942 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGMAMEPD 8 L MA+EP+ Sbjct: 505 LAMALEPN 512>XP_006712050 Length = 1716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 GMAMEPD 8 GMA PD Sbjct: 71 GMAFSPD 77>XP_005264311 Length = 1727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 GMAMEPD 8 GMA PD Sbjct: 71 GMAFSPD 77>XP_006712049 Length = 1728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 GMAMEPD 8 GMA PD Sbjct: 50 GMAFSPD 56Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.138 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 759,369 Number of extensions: 1019 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |