Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_997213 17 4312 NP_112184 16 5631 NP_001171817 16 5631 NP_001008892 16 5631 NP_001008894 16 5631 NP_001008860 16 5631 NP_001171818 16 5631 XP_006720431 16 5631 XP_006720430 16 5631 XP_006720429 16 5631 XP_005272610 16 5631 XP_005272609 16 5631 XP_006720428 16 5631 XP_005272606 16 5631 XP_005272605 16 5631 XP_005272607 16 5631 XP_006720427 16 5631 XP_005272604 16 5631 XP_005272603 16 5631 NP_001073960 16 7355 NP_055503 16 7355 NP_001193620 16 7355 NP_998759 16 7355 XP_006717605 16 7355 NP_115880 16 7355 NP_000375 15 9605 NP_000184 15 9605 NP_689905 15 9605 NP_001011551 15 9605 XP_006726390 15 9605 XP_006726389 15 9605 XP_006726388 15 9605 XP_006726387 15 9605 XP_006711142 15 9605 XP_006711141 15 9605 XP_006711140 15 9605 XP_006710131 15 9605 XP_006710130 15 9605 XP_006710129 15 9605 XP_006710128 15 9605 NP_789791 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLAIKES Sbjct: 2261 LGLAIKES 2268>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLAIKES Sbjct: 2253 LGLAIKES 2260>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLAIKES Sbjct: 2214 LGLAIKES 2221>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLAIKES Sbjct: 2293 LGLAIKES 2300>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLAIKES Sbjct: 2306 LGLAIKES 2313>NP_997213 Length = 410 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LGLAIKESV 9 LG+AIKE + Sbjct: 257 LGIAIKELI 265>NP_112184 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>NP_001171817 Length = 341 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 180 LGIAIKE 186>NP_001008892 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>NP_001008894 Length = 341 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 180 LGIAIKE 186>NP_001008860 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>NP_001171818 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_006720431 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 113 LGIAIKE 119>XP_006720430 Length = 341 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 180 LGIAIKE 186>XP_006720429 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_005272610 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_005272609 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_006720428 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_005272606 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_005272605 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_005272607 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_006720427 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_005272604 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>XP_005272603 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LG+AIKE Sbjct: 199 LGIAIKE 205>NP_001073960 Length = 845 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GLAIKESV 9 GL+I+ESV Sbjct: 836 GLSIQESV 843>NP_055503 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GLAIKESV 9 GL+I+ESV Sbjct: 819 GLSIQESV 826>NP_001193620 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLAIKES 8 G+A+KES Sbjct: 140 GIAVKES 146>NP_998759 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLAIKES 8 G+A+KES Sbjct: 131 GIAVKES 137>XP_006717605 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GLAIKESV 9 GL+I+ESV Sbjct: 847 GLSIQESV 854>NP_115880 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLAIKES 8 G+A+KES Sbjct: 37 GIAVKES 43>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LAIKESV 9 LA+KESV Sbjct: 2822 LALKESV 2828>NP_000184 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGLAIKES 8 LG+A+K S Sbjct: 455 LGMAVKSS 462>NP_689905 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LGLAIKESV 9 +GL+IKE++ Sbjct: 251 VGLSIKEAM 259>NP_001011551 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LGLAIKESV 9 +GL+IKE++ Sbjct: 251 VGLSIKEAM 259>XP_006726390 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006726389 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006726388 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006726387 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006711142 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006711141 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006711140 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006710131 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006710130 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006710129 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>XP_006710128 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LGLAIKES 8 LGLA+K++ Sbjct: 82 LGLALKDT 89>NP_789791 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LGLAIKE 7 LGLAIK+ Sbjct: 454 LGLAIKK 460Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.137 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 404,965 Number of extensions: 592 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |