Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 21 229 NP_004561 21 229 XP_005253450 21 229 XP_006719151 21 229 NP_149109 17 4312 NP_055543 17 4312 NP_001271188 17 4312 XP_006724587 17 4312 XP_005274689 17 4312 XP_006716465 17 4312 NP_444256 16 5631 NP_444254 16 5631 NP_444253 16 5631 NP_001017420 16 5631 NP_444255 16 5631 NP_689914 16 5631 XP_006716360 16 5631 XP_005247551 16 5631 XP_005247550 16 5631 XP_006713712 16 5631 XP_005247549 16 5631 NP_848648 16 7355 NP_612815 16 7355 NP_055259 16 7355 NP_001273343 16 7355 XP_006723908 16 7355 XP_005260544 16 7355 XP_005260543 16 7355 XP_005260542 16 7355 XP_005260540 16 7355 XP_005260541 16 7355 XP_006723907 16 7355 XP_006723906 16 7355 XP_005260538 16 7355 XP_005260539 16 7355 NP_000526 15 9605 NP_036595 15 9605 NP_570855 15 9605 NP_570856 15 9605 NP_065683 15 9605 NP_002243 15 9605 NP_001269357 15 9605 NP_001123492 15 9605 NP_001123493 15 9605 NP_065998 15 9605 NP_005168 15 9605 XP_005257520 15 9605 XP_005257518 15 9605 XP_005257516 15 9605 XP_005256134 15 9605 XP_005256132 15 9605 XP_006721303 15 9605 XP_005256131 15 9605 XP_006719381 15 9605 XP_006719380 15 9605 XP_005253620 15 9605 XP_005250451 15 9605 XP_005250450 15 9605 XP_006715807 15 9605 XP_006715806 15 9605 XP_006715805 15 9605 NP_003046 15 9605>NP_001275701 Length = 1486 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGFEQIVDE 9 LGF+QIVDE Sbjct: 38 LGFDQIVDE 46>NP_004561 Length = 1445 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGFEQIVDE 9 LGF+QIVDE Sbjct: 38 LGFDQIVDE 46>XP_005253450 Length = 1486 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGFEQIVDE 9 LGF+QIVDE Sbjct: 38 LGFDQIVDE 46>XP_006719151 Length = 1486 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LGFEQIVDE 9 LGF+QIVDE Sbjct: 38 LGFDQIVDE 46>NP_149109 Length = 596 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FE+IVDE Sbjct: 368 FERIVDE 374>NP_055543 Length = 1322 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LGFEQIVDE 9 LG+E ++DE Sbjct: 669 LGYETLLDE 677>NP_001271188 Length = 1820 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LGFEQIVD 8 +GFE I+D Sbjct: 673 VGFEDIID 680>XP_006724587 Length = 1732 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LGFEQIVDE 9 LG+E ++DE Sbjct: 639 LGYETLLDE 647>XP_005274689 Length = 1762 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LGFEQIVDE 9 LG+E ++DE Sbjct: 669 LGYETLLDE 677>XP_006716465 Length = 1826 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GFEQIVDE 9 GF Q+VD+ Sbjct: 1807 GFHQLVDQ 1814>NP_444256 Length = 1794 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FE+I+DE Sbjct: 1478 FERIIDE 1484>NP_444254 Length = 1845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FE+I+DE Sbjct: 1478 FERIIDE 1484>NP_444253 Length = 1914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FE+I+DE Sbjct: 1547 FERIIDE 1553>NP_001017420 Length = 601 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGFEQIV 7 LGF+Q+V Sbjct: 463 LGFQQVV 469>NP_444255 Length = 1863 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FE+I+DE Sbjct: 1547 FERIIDE 1553>NP_689914 Length = 5058 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GFEQIVDE 9 GF Q++DE Sbjct: 1178 GFTQLLDE 1185>XP_006716360 Length = 601 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGFEQIV 7 LGF+Q+V Sbjct: 463 LGFQQVV 469>XP_005247551 Length = 1855 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FE+I+DE Sbjct: 1488 FERIIDE 1494>XP_005247550 Length = 1856 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FE+I+DE Sbjct: 1489 FERIIDE 1495>XP_006713712 Length = 1923 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FE+I+DE Sbjct: 1557 FERIIDE 1563>XP_005247549 Length = 1924 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FE+I+DE Sbjct: 1557 FERIIDE 1563>NP_848648 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF Q+VD Sbjct: 23 GFSQLVD 29>NP_612815 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>NP_055259 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEQIVD 8 FEQ+VD Sbjct: 325 FEQVVD 330>NP_001273343 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FEQIVD 8 FEQ+VD Sbjct: 325 FEQVVD 330>XP_006723908 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>XP_005260544 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>XP_005260543 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>XP_005260542 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>XP_005260540 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>XP_005260541 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>XP_006723907 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>XP_006723906 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>XP_005260538 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>XP_005260539 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FEQIVDE 9 FEQ+V+E Sbjct: 123 FEQVVNE 129>NP_000526 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GFEQIVDE 9 GF+ ++DE Sbjct: 750 GFDFVIDE 757>NP_036595 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 378 GFQNIVD 384>NP_570855 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 375 GFQNIVD 381>NP_570856 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 375 GFQNIVD 381>NP_065683 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 375 GFQNIVD 381>NP_002243 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GFEQIVDE 9 GF+Q VD+ Sbjct: 23 GFKQSVDQ 30>NP_001269357 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GFEQIVDE 9 GF+Q VD+ Sbjct: 23 GFKQSVDQ 30>NP_001123492 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 380 GFQNIVD 386>NP_001123493 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 373 GFQNIVD 379>NP_065998 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GFE I+D Sbjct: 241 GFESILD 247>NP_005168 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 373 GFQNIVD 379>XP_005257520 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 380 GFQNIVD 386>XP_005257518 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 380 GFQNIVD 386>XP_005257516 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 380 GFQNIVD 386>XP_005256134 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GFE I+D Sbjct: 279 GFESILD 285>XP_005256132 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GFE I+D Sbjct: 241 GFESILD 247>XP_006721303 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GFE I+D Sbjct: 241 GFESILD 247>XP_005256131 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GFE I+D Sbjct: 279 GFESILD 285>XP_006719381 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 104 GFQNIVD 110>XP_006719380 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 207 GFQNIVD 213>XP_005253620 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 378 GFQNIVD 384>XP_005250451 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 375 GFQNIVD 381>XP_005250450 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GFEQIVD 8 GF+ IVD Sbjct: 375 GFQNIVD 381>XP_006715807 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GFEQIVDE 9 GF+ ++DE Sbjct: 439 GFDFVIDE 446>XP_006715806 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GFEQIVDE 9 GF+ ++DE Sbjct: 698 GFDFVIDE 705>XP_006715805 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GFEQIVDE 9 GF+ ++DE Sbjct: 748 GFDFVIDE 755>NP_003046 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LGFEQI 6 LGFEQ+ Sbjct: 446 LGFEQL 451Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.150 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 523,715 Number of extensions: 1028 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |