Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001120936 17 2528 NP_001001709 17 3301 NP_001138573 17 3301 XP_006718727 17 3301 NP_116251 17 3301 XP_005276251 17 4312 XP_005245763 17 4312 NP_001842 16 5631 NP_511040 16 5631 XP_006715394 16 5631 XP_005272081 16 5631 XP_006710156 16 5631 XP_006710243 16 5631 NP_060135 16 5631 NP_004237 16 7355 XP_005256918 16 7355 NP_115499 15 9605 NP_954648 15 9605 NP_954649 15 9605 NP_542410 15 9605 NP_542411 15 9605 NP_542412 15 9605 NP_001132914 15 9605 NP_919228 15 9605 NP_001161206 15 9605 NP_001245258 15 9605 NP_001245260 15 9605 NP_055128 15 9605 NP_001139192 15 9605 NP_001161205 15 9605 NP_065175 15 9605 NP_057323 15 9605 NP_001245259 15 9605 NP_818932 15 9605 NP_036288 15 9605 XP_005260382 15 9605 XP_005260381 15 9605 XP_006723804 15 9605 XP_005260380 15 9605 XP_006723803 15 9605 XP_005260379 15 9605 XP_005260378 15 9605 XP_005260377 15 9605 XP_006723802 15 9605 XP_005260376 15 9605 XP_006723801 15 9605 XP_006723800 15 9605 XP_006723799 15 9605 XP_005256732 15 9605 XP_006717031 15 9605 XP_006717030 15 9605 XP_006717029 15 9605>NP_001120936 Length = 3925 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GETGAQR 8 GETGAQ+ Sbjct: 2689 GETGAQK 2695>NP_001001709 Length = 121 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETGAQRK 9 G TG QRK Sbjct: 25 GRTGGQRK 32>NP_001138573 Length = 712 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGETGAQRK 9 LG+TG RK Sbjct: 329 LGKTGGSRK 337>XP_006718727 Length = 712 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LGETGAQRK 9 LG+TG RK Sbjct: 329 LGKTGGSRK 337>NP_116251 Length = 642 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GETGAQRK 9 GE G QRK Sbjct: 107 GEVGTQRK 114>XP_005276251 Length = 219 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LGETGAQRK 9 LG++GA+R+ Sbjct: 97 LGDSGARRR 105>XP_005245763 Length = 219 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LGETGAQRK 9 LG++GA+R+ Sbjct: 97 LGDSGARRR 105>NP_001842 Length = 921 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LGETGAQ 7 LGE GAQ Sbjct: 456 LGEVGAQ 462>NP_511040 Length = 678 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LGETGAQ 7 LGE GAQ Sbjct: 213 LGEVGAQ 219>XP_006715394 Length = 627 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LGETGAQ 7 LGE GAQ Sbjct: 162 LGEVGAQ 168>XP_005272081 Length = 192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGETGAQRK 9 +GET +RK Sbjct: 91 IGETNVERK 99>XP_006710156 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGETGA 6 LGETGA Sbjct: 164 LGETGA 169>XP_006710243 Length = 98 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LGETGA 6 LGETGA Sbjct: 56 LGETGA 61>NP_060135 Length = 170 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LGETGAQRK 9 +GET +RK Sbjct: 69 IGETNVERK 77>NP_004237 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LGETGAQ 7 LGE GAQ Sbjct: 510 LGELGAQ 516>XP_005256918 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LGETGAQ 7 LGE GAQ Sbjct: 357 LGELGAQ 363>NP_115499 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LGETGAQ 7 LGE GAQ Sbjct: 491 LGEGGAQ 497>NP_954648 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LGETGAQ 7 LGE GAQ Sbjct: 441 LGEGGAQ 447>NP_954649 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LGETGAQ 7 LGE GAQ Sbjct: 491 LGEGGAQ 497>NP_542410 Length = 1629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GETGAQ 7 G+TGAQ Sbjct: 467 GDTGAQ 472>NP_542411 Length = 1736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GETGAQ 7 G+TGAQ Sbjct: 574 GDTGAQ 579>NP_542412 Length = 1650 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GETGAQ 7 G+TGAQ Sbjct: 488 GDTGAQ 493>NP_001132914 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE G+QR Sbjct: 211 GENGSQR 217>NP_919228 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE G+QR Sbjct: 211 GENGSQR 217>NP_001161206 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GETGAQRK 9 GE G QR+ Sbjct: 1051 GEAGTQRQ 1058>NP_001245258 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>NP_001245260 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 397 GESGGQR 403>NP_055128 Length = 157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LGETGAQ 7 LG+TGA+ Sbjct: 88 LGQTGAR 94>NP_001139192 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LGETGAQRK 9 LGE QRK Sbjct: 11 LGELNEQRK 19>NP_001161205 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GETGAQRK 9 GE G QR+ Sbjct: 881 GEAGTQRQ 888>NP_065175 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GETGAQRK 9 GE G QR+ Sbjct: 1021 GEAGTQRQ 1028>NP_057323 Length = 3530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GET AQR Sbjct: 2360 GETEAQR 2366>NP_001245259 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 428 GESGGQR 434>NP_818932 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 397 GESGGQR 403>NP_036288 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_005260382 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_005260381 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_006723804 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 397 GESGGQR 403>XP_005260380 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_006723803 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_005260379 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 458 GESGGQR 464>XP_005260378 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_005260377 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_006723802 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 458 GESGGQR 464>XP_005260376 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_006723801 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_006723800 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_006723799 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE+G QR Sbjct: 459 GESGGQR 465>XP_005256732 Length = 3531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GET AQR Sbjct: 2361 GETEAQR 2367>XP_006717031 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE G+QR Sbjct: 121 GENGSQR 127>XP_006717030 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE G+QR Sbjct: 121 GENGSQR 127>XP_006717029 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GETGAQR 8 GE G+QR Sbjct: 121 GENGSQR 127Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.128 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 610,590 Number of extensions: 1424 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |