Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 20 390 NP_004561 20 390 NP_001275703 20 390 XP_005253450 20 390 XP_006719151 20 390 NP_001089 17 4312 NP_001137502 17 4312 XP_005253056 17 4312 NP_078938 17 4312 NP_006796 17 4312 NP_005384 16 5631 NP_001156729 16 5631 NP_059984 16 5631 NP_898885 16 5631 XP_006724893 16 5631 XP_006724892 16 5631 XP_005274762 16 5631 NP_001010986 16 7355 NP_775965 16 7355 XP_006724816 16 7355 XP_006724815 16 7355 XP_006724814 16 7355 XP_005262462 16 7355 NP_001186480 15 9605 NP_079455 15 9605 NP_001186552 15 9605 NP_001186481 15 9605 NP_071377 15 9605 NP_006717 15 9605 NP_056020 15 9605 NP_001186211 15 9605 NP_001092261 15 9605 NP_067065 15 9605 NP_115565 15 9605 NP_078904 15 9605 NP_001182412 15 9605 XP_006722360 15 9605 XP_006720028 15 9605 XP_005268363 15 9605 XP_005268362 15 9605 XP_005268358 15 9605 XP_005268360 15 9605 XP_005268357 15 9605 XP_005268356 15 9605 XP_005252173 15 9605 XP_005263434 15 9605 XP_005263433 15 9605 XP_005263432 15 9605 XP_005263431 15 9605 XP_006714492 15 9605 XP_005263430 15 9605 XP_005263429 15 9605 XP_005265433 15 9605 XP_005265432 15 9605 XP_005265431 15 9605 XP_005273222 15 9605 XP_006711450 15 9605 XP_005273221 15 9605 NP_149040 15 9605 NP_001092260 15 9605 NP_001270 15 9605>NP_001275701 Length = 1486 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LFVGAINIR 9 +FVGAINIR Sbjct: 1459 VFVGAINIR 1467>NP_004561 Length = 1445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LFVGAINIR 9 +FVGAINIR Sbjct: 1418 VFVGAINIR 1426>NP_001275703 Length = 1264 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LFVGAINIR 9 +FVGAINIR Sbjct: 1237 VFVGAINIR 1245>XP_005253450 Length = 1486 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LFVGAINIR 9 +FVGAINIR Sbjct: 1459 VFVGAINIR 1467>XP_006719151 Length = 1486 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LFVGAINIR 9 +FVGAINIR Sbjct: 1459 VFVGAINIR 1467>NP_001089 Length = 780 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFVGAINI 8 L +GAINI Sbjct: 617 LLIGAINI 624>NP_001137502 Length = 953 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFVGAINIR 9 LF+ A NIR Sbjct: 23 LFIAATNIR 31>XP_005253056 Length = 1025 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFVGAINIR 9 LF+ A NIR Sbjct: 95 LFIAATNIR 103>NP_078938 Length = 1025 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFVGAINIR 9 LF+ A NIR Sbjct: 95 LFIAATNIR 103>NP_006796 Length = 305 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LFVGAINIR 9 LF+G +N++ Sbjct: 9 LFIGGLNVQ 17>NP_005384 Length = 1909 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 L+VGA+N Sbjct: 66 LYVGAVN 72>NP_001156729 Length = 1932 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 L+VGA+N Sbjct: 89 LYVGAVN 95>NP_059984 Length = 1871 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 +FVGA+N Sbjct: 45 VFVGAVN 51>NP_898885 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LFVGAINIR 9 ++VG +N+R Sbjct: 113 MYVGLVNLR 121>XP_006724893 Length = 1719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 +FVGA+N Sbjct: 45 VFVGAVN 51>XP_006724892 Length = 1841 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 +FVGA+N Sbjct: 45 VFVGAVN 51>XP_005274762 Length = 1853 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 +FVGA+N Sbjct: 45 VFVGAVN 51>NP_001010986 Length = 1119 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG INI Sbjct: 224 FVGRINI 230>NP_775965 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG INI Sbjct: 224 FVGRINI 230>XP_006724816 Length = 1105 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG INI Sbjct: 221 FVGRINI 227>XP_006724815 Length = 1105 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG INI Sbjct: 221 FVGRINI 227>XP_006724814 Length = 1116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG INI Sbjct: 221 FVGRINI 227>XP_005262462 Length = 1129 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG INI Sbjct: 221 FVGRINI 227>NP_001186480 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 FVGAINIR 9 F+G +N++ Sbjct: 165 FIGCLNVK 172>NP_079455 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 ++VGAIN Sbjct: 62 VYVGAIN 68>NP_001186552 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 FVGAINIR 9 F+G +N++ Sbjct: 168 FIGCLNVK 175>NP_001186481 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 FVGAINIR 9 F+G +N++ Sbjct: 155 FIGCLNVK 162>NP_071377 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 FVGAINIR 9 F+G +N++ Sbjct: 155 FIGCLNVK 162>NP_006717 Length = 2863 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 F+G +NI Sbjct: 598 FIGTVNI 604>NP_056020 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG IN+ Sbjct: 226 FVGRINV 232>NP_001186211 Length = 2851 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 F+G +NI Sbjct: 598 FIGTVNI 604>NP_001092261 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 FVGAIN 7 F+GA+N Sbjct: 21 FIGAVN 26>NP_067065 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 FVGAIN 7 F+GA+N Sbjct: 21 FIGAVN 26>NP_115565 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG IN+ Sbjct: 226 FVGRINV 232>NP_078904 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LFVGAINI 8 +FVG +N+ Sbjct: 375 VFVGQVNV 382>NP_001182412 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LFVGAINI 8 +FVG +N+ Sbjct: 375 VFVGQVNV 382>XP_006722360 Length = 120 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 FVGAINIR 9 F+G +N++ Sbjct: 42 FIGCLNVK 49>XP_006720028 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG IN+ Sbjct: 226 FVGRINV 232>XP_005268363 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG IN+ Sbjct: 226 FVGRINV 232>XP_005268362 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG IN+ Sbjct: 226 FVGRINV 232>XP_005268358 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG IN+ Sbjct: 226 FVGRINV 232>XP_005268360 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG IN+ Sbjct: 226 FVGRINV 232>XP_005268357 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG IN+ Sbjct: 226 FVGRINV 232>XP_005268356 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 FVG IN+ Sbjct: 226 FVGRINV 232>XP_005252173 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFVGAI 6 LFVGAI Sbjct: 286 LFVGAI 291>XP_005263434 Length = 1557 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 F+G +NI Sbjct: 598 FIGTVNI 604>XP_005263433 Length = 2832 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 F+G +NI Sbjct: 598 FIGTVNI 604>XP_005263432 Length = 2852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 F+G +NI Sbjct: 598 FIGTVNI 604>XP_005263431 Length = 2857 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 F+G +NI Sbjct: 598 FIGTVNI 604>XP_006714492 Length = 2867 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 F+G +NI Sbjct: 598 FIGTVNI 604>XP_005263430 Length = 2868 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 F+G +NI Sbjct: 598 FIGTVNI 604>XP_005263429 Length = 2868 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 FVGAINI 8 F+G +NI Sbjct: 598 FIGTVNI 604>XP_005265433 Length = 164 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 FVGAINIR 9 F+G +N++ Sbjct: 81 FIGCLNVK 88>XP_005265432 Length = 164 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 FVGAINIR 9 F+G +N++ Sbjct: 81 FIGCLNVK 88>XP_005265431 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 FVGAINIR 9 F+G +N++ Sbjct: 155 FIGCLNVK 162>XP_005273222 Length = 1823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 ++VGAIN Sbjct: 77 VYVGAIN 83>XP_006711450 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 ++VGAIN Sbjct: 77 VYVGAIN 83>XP_005273221 Length = 1974 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LFVGAIN 7 ++VGAIN Sbjct: 77 VYVGAIN 83>NP_149040 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFVGAI 6 LFVGAI Sbjct: 286 LFVGAI 291>NP_001092260 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 FVGAIN 7 F+GA+N Sbjct: 21 FIGAVN 26>NP_001270 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 FVGAINIR 9 F+G +N++ Sbjct: 141 FIGCLNVK 148Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.161 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 339,051 Number of extensions: 595 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |