Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 18 1135 XP_005273257 18 1135 NP_612152 17 3301 XP_006715715 17 3301 NP_877949 16 7355 NP_000924 16 7355 NP_001166117 16 7355 XP_005260785 16 7355 XP_006723635 16 7355 XP_006723634 16 7355 XP_006723633 16 7355 XP_005260781 16 7355 XP_006723632 16 7355 XP_006723631 16 7355 NP_001460 15 9605 NP_001275906 15 9605 NP_001275905 15 9605 NP_001275907 15 9605 NP_001171718 15 9605 NP_062565 15 9605 NP_001171715 15 9605 NP_001171720 15 9605 NP_001171714 15 9605 NP_001171717 15 9605 NP_001171722 15 9605 NP_001171721 15 9605 NP_001171723 15 9605 NP_001171716 15 9605 NP_001171719 15 9605 NP_001161752 15 9605 NP_001161750 15 9605 NP_056287 15 9605 NP_588614 15 9605 NP_060647 15 9605 NP_001096654 15 9605 NP_060377 15 9605 NP_001264242 15 9605 NP_001193856 15 9605 XP_006717541 15 9605 XP_005252593 15 9605 XP_005252592 15 9605 XP_005252591 15 9605 XP_006717540 15 9605 XP_006717539 15 9605 XP_006717538 15 9605 XP_006717537 15 9605 XP_005252589 15 9605 XP_006717535 15 9605 XP_005252588 15 9605 XP_005252587 15 9605 XP_005252585 15 9605 XP_006715067 15 9605 XP_006714086 15 9605 XP_006714085 15 9605 XP_006714084 15 9605>NP_064450 Length = 1722 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 L SDIQQAI Sbjct: 195 LLSDIQQAI 203>XP_005273257 Length = 1726 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 L SDIQQAI Sbjct: 195 LLSDIQQAI 203>NP_612152 Length = 2849 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FSDIQQAI 9 +SDIQ+AI Sbjct: 1074 YSDIQEAI 1081>XP_006715715 Length = 2023 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FSDIQQAI 9 +SDIQ+AI Sbjct: 1026 YSDIQEAI 1033>NP_877949 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 384 LFKDVIQAI 392>NP_000924 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 384 LFKDVIQAI 392>NP_001166117 Length = 1187 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 384 LFKDVIQAI 392>XP_005260785 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 116 LFKDVIQAI 124>XP_006723635 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 384 LFKDVIQAI 392>XP_006723634 Length = 1187 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 384 LFKDVIQAI 392>XP_006723633 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 384 LFKDVIQAI 392>XP_005260781 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 384 LFKDVIQAI 392>XP_006723632 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 384 LFKDVIQAI 392>XP_006723631 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QAI Sbjct: 384 LFKDVIQAI 392>NP_001460 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFSDIQ 6 LFSD+Q Sbjct: 153 LFSDVQ 158>NP_001275906 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFSDIQ 6 LFSD+Q Sbjct: 112 LFSDVQ 117>NP_001275905 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFSDIQ 6 LFSD+Q Sbjct: 153 LFSDVQ 158>NP_001275907 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFSDIQ 6 LFSD+Q Sbjct: 103 LFSDVQ 108>NP_001171718 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_062565 Length = 1356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001171715 Length = 1340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001171720 Length = 1244 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001171714 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001171717 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001171722 Length = 1000 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001171721 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001171723 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001171716 Length = 1319 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001171719 Length = 1266 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>NP_001161752 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 LF+D++ A+ Sbjct: 382 LFNDVESAL 390>NP_001161750 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 LF+D++ A+ Sbjct: 382 LFNDVESAL 390>NP_056287 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 LF+D++ A+ Sbjct: 382 LFNDVESAL 390>NP_588614 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LFSDIQQAI 9 LF D+ QA+ Sbjct: 406 LFRDVVQAV 414>NP_060647 Length = 1770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SDIQQAI 9 SD+Q+AI Sbjct: 1060 SDVQEAI 1066>NP_001096654 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DIQQAI 9 DIQQAI Sbjct: 849 DIQQAI 854>NP_060377 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FSDIQQ 7 FSD+QQ Sbjct: 126 FSDLQQ 131>NP_001264242 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DIQQAI 9 DIQQAI Sbjct: 1072 DIQQAI 1077>NP_001193856 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DIQQAI 9 DIQQAI Sbjct: 1119 DIQQAI 1124>XP_006717541 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_005252593 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_005252592 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_005252591 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_006717540 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_006717539 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_006717538 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_006717537 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_005252589 Length = 1309 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_006717535 Length = 1316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_005252588 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_005252587 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_005252585 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFSDIQQAI 9 +FS IQQA+ Sbjct: 23 VFSLIQQAV 31>XP_006715067 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DIQQAI 9 DIQQAI Sbjct: 1119 DIQQAI 1124>XP_006714086 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SDIQQAI 9 SD+Q+AI Sbjct: 980 SDVQEAI 986>XP_006714085 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SDIQQAI 9 SD+Q+AI Sbjct: 980 SDVQEAI 986>XP_006714084 Length = 1753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SDIQQAI 9 SD+Q+AI Sbjct: 1060 SDVQEAI 1066Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.143 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 410,084 Number of extensions: 607 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |