Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_775771 17 4312 NP_078880 17 4312 NP_001139547 17 4312 NP_001139548 17 4312 XP_006720466 17 4312 XP_005254230 17 4312 XP_006720465 17 4312 XP_005254228 17 4312 NP_078782 16 5631 NP_001273352 16 5631 NP_003493 16 5631 NP_851393 16 5631 NP_004646 16 5631 NP_001363 16 5631 XP_005257776 16 5631 XP_005255667 16 5631 XP_005255666 16 5631 XP_005255665 16 5631 XP_005255664 16 5631 XP_005246907 16 5631 NP_004653 16 5631 NP_002038 16 7355 NP_064425 16 7355 NP_001001290 16 7355 XP_006715749 16 7355 XP_006714032 16 7355 XP_006714031 16 7355 NP_005623 15 9605 NP_001273767 15 9605 NP_001501 15 9605 NP_001192222 15 9605 NP_001192223 15 9605 NP_000712 15 9605 NP_064506 15 9605 NP_001011703 15 9605 NP_258257 15 9605 NP_115524 15 9605 XP_005255575 15 9605 XP_005255574 15 9605 XP_005255573 15 9605 XP_006720998 15 9605 XP_005255571 15 9605 XP_006720997 15 9605 XP_006720996 15 9605 XP_006720995 15 9605 XP_006720994 15 9605 XP_005269237 15 9605 XP_005269236 15 9605 XP_005269235 15 9605 XP_006719693 15 9605 XP_005269233 15 9605 XP_005252354 15 9605 XP_006714258 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LFRTFLGEL 9 LFR FLGEL Sbjct: 196 LFRAFLGEL 204>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LFRTFLGEL 9 LFR FLGEL Sbjct: 196 LFRAFLGEL 204>NP_775771 Length = 1244 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FRTFLGEL 9 F++FLG+L Sbjct: 988 FKSFLGDL 995>NP_078880 Length = 665 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RTFLGEL 9 RTFLG+L Sbjct: 360 RTFLGKL 366>NP_001139547 Length = 631 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RTFLGEL 9 RTFLG+L Sbjct: 360 RTFLGKL 366>NP_001139548 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RTFLGEL 9 RTFLG+L Sbjct: 201 RTFLGKL 207>XP_006720466 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FRTFLGEL 9 F++FLG+L Sbjct: 919 FKSFLGDL 926>XP_005254230 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FRTFLGEL 9 F++FLG+L Sbjct: 919 FKSFLGDL 926>XP_006720465 Length = 1239 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FRTFLGEL 9 F++FLG+L Sbjct: 983 FKSFLGDL 990>XP_005254228 Length = 1250 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FRTFLGEL 9 F++FLG+L Sbjct: 994 FKSFLGDL 1001>NP_078782 Length = 654 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LFRTFLGE 8 LFR LGE Sbjct: 204 LFRALLGE 211>NP_001273352 Length = 654 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LFRTFLGE 8 LFR LGE Sbjct: 204 LFRALLGE 211>NP_003493 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFRTFL 6 LFRTFL Sbjct: 101 LFRTFL 106>NP_851393 Length = 826 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFRTFL 6 LFRTFL Sbjct: 101 LFRTFL 106>NP_004646 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFRTFL 6 LFRTFL Sbjct: 94 LFRTFL 99>NP_001363 Length = 4486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFRTFLGE 8 L RT+LGE Sbjct: 4126 LCRTYLGE 4133>XP_005257776 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFRTFL 6 LFRTFL Sbjct: 94 LFRTFL 99>XP_005255667 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFRTFL 6 LFRTFL Sbjct: 150 LFRTFL 155>XP_005255666 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFRTFL 6 LFRTFL Sbjct: 101 LFRTFL 106>XP_005255665 Length = 875 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFRTFL 6 LFRTFL Sbjct: 150 LFRTFL 155>XP_005255664 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LFRTFL 6 LFRTFL Sbjct: 150 LFRTFL 155>XP_005246907 Length = 654 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LFRTFLGE 8 LFR LGE Sbjct: 204 LFRALLGE 211>NP_004653 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFRTFLGE 8 L RT+LGE Sbjct: 438 LCRTYLGE 445>NP_002038 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LFRTFLG 7 +F+TF+G Sbjct: 281 MFKTFIG 287>NP_064425 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FRTFLGE 8 F+TFLG+ Sbjct: 273 FQTFLGK 279>NP_001001290 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FRTFLGE 8 F+TFLG+ Sbjct: 244 FQTFLGK 250>XP_006715749 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 LFRTFLG 7 +F+TF+G Sbjct: 158 MFKTFIG 164>XP_006714032 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FRTFLGE 8 F+TFLG+ Sbjct: 244 FQTFLGK 250>XP_006714031 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FRTFLGE 8 F+TFLG+ Sbjct: 273 FQTFLGK 279>NP_005623 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 55 FRNFLGK 61>NP_001273767 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LFRTFLGEL 9 +FRT +G+L Sbjct: 43 VFRTAVGDL 51>NP_001501 Length = 1007 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LFRTFLGEL 9 +FRT +G+L Sbjct: 43 VFRTAVGDL 51>NP_001192222 Length = 2313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRTFLGEL 9 FR+F G L Sbjct: 1646 FRSFFGSL 1653>NP_001192223 Length = 2251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRTFLGEL 9 FR+F G L Sbjct: 1627 FRSFFGSL 1634>NP_000712 Length = 2270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRTFLGEL 9 FR+F G L Sbjct: 1646 FRSFFGSL 1653>NP_064506 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RTFLGEL 9 R+FLG+L Sbjct: 807 RSFLGQL 813>NP_001011703 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TFLGEL 9 TF+GEL Sbjct: 177 TFIGEL 182>NP_258257 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TFLGEL 9 TF+GEL Sbjct: 177 TFIGEL 182>NP_115524 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 FRTFLG 7 FRTF G Sbjct: 456 FRTFFG 461>XP_005255575 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 55 FRNFLGK 61>XP_005255574 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 55 FRNFLGK 61>XP_005255573 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 55 FRNFLGK 61>XP_006720998 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 123 FRNFLGK 129>XP_005255571 Length = 1112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 81 FRNFLGK 87>XP_006720997 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 93 FRNFLGK 99>XP_006720996 Length = 1153 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 122 FRNFLGK 128>XP_006720995 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 123 FRNFLGK 129>XP_006720994 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRTFLGE 8 FR FLG+ Sbjct: 123 FRNFLGK 129>XP_005269237 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 FRTFLG 7 FRTF G Sbjct: 456 FRTFFG 461>XP_005269236 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 FRTFLG 7 FRTF G Sbjct: 456 FRTFFG 461>XP_005269235 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 FRTFLG 7 FRTF G Sbjct: 456 FRTFFG 461>XP_006719693 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 FRTFLG 7 FRTF G Sbjct: 456 FRTFFG 461>XP_005269233 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 FRTFLG 7 FRTF G Sbjct: 456 FRTFFG 461>XP_005252354 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TFLGEL 9 TF+GEL Sbjct: 162 TFIGEL 167>XP_006714258 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LFRTFLGEL 9 +FRT +G+L Sbjct: 43 VFRTAVGDL 51Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.165 0.489 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 415,417 Number of extensions: 608 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |