Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 18 1135 NP_000242 18 1135 XP_005264389 18 1135 XP_006725230 17 4312 XP_006720283 17 4312 XP_005267569 17 4312 XP_005267568 17 4312 XP_006720170 17 4312 XP_006720169 17 4312 NP_065869 17 4312 NP_001129514 16 5631 NP_079543 16 5631 NP_001264049 16 5631 NP_001248363 16 5631 NP_001071062 16 7355 NP_001091995 16 7355 NP_001158058 16 7355 NP_001025025 16 7355 NP_001025022 16 7355 NP_060674 16 7355 NP_003710 16 7355 NP_001025023 16 7355 XP_006720367 16 7355 XP_005266401 16 7355 XP_005266400 16 7355 XP_006715623 16 7355 XP_006715622 16 7355 XP_005267190 16 7355 XP_005267189 16 7355 XP_005267187 16 7355 XP_005267185 16 7355 XP_005267184 16 7355 XP_005248681 16 7355 XP_005248680 16 7355 XP_006714790 16 7355 XP_005248678 16 7355 XP_006714789 16 7355 XP_006714788 16 7355 XP_006711681 16 7355 XP_006711680 16 7355 XP_005245637 16 7355 NP_001025024 16 7355 NP_009055 16 7355 NP_001273615 16 7355 NP_001026 15 9605 NP_004357 15 9605 NP_001164560 15 9605 NP_001164559 15 9605 NP_001164558 15 9605 XP_005247181 15 9605 XP_006713553 15 9605 XP_006713552 15 9605 XP_006713551 15 9605 XP_006711873 15 9605 XP_006711872 15 9605 XP_006711871 15 9605 XP_006711870 15 9605 XP_006711869 15 9605 XP_006711868 15 9605 XP_006711867 15 9605 XP_006711866 15 9605 XP_006711865 15 9605 NP_001862 15 9605>NP_001245210 Length = 868 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LFQVSVEDT 9 LFQ SVEDT Sbjct: 246 LFQGSVEDT 254>NP_000242 Length = 934 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LFQVSVEDT 9 LFQ SVEDT Sbjct: 312 LFQGSVEDT 320>XP_005264389 Length = 921 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LFQVSVEDT 9 LFQ SVEDT Sbjct: 312 LFQGSVEDT 320>XP_006725230 Length = 2636 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSVED Sbjct: 1685 LVQVSVED 1692>XP_006720283 Length = 2636 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSVED Sbjct: 1685 LVQVSVED 1692>XP_005267569 Length = 1340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FQVSVED 8 FQVS+ED Sbjct: 520 FQVSLED 526>XP_005267568 Length = 1340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FQVSVED 8 FQVS+ED Sbjct: 520 FQVSLED 526>XP_006720170 Length = 1354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FQVSVED 8 FQVS+ED Sbjct: 534 FQVSLED 540>XP_006720169 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FQVSVED 8 FQVS+ED Sbjct: 541 FQVSLED 547>NP_065869 Length = 2458 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSVED Sbjct: 1507 LVQVSVED 1514>NP_001129514 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV +EDT Sbjct: 215 FQVVLEDT 222>NP_079543 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV +EDT Sbjct: 154 FQVVLEDT 161>NP_001264049 Length = 127 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 LFQ+ VED Sbjct: 89 LFQMHVED 96>NP_001248363 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV +EDT Sbjct: 41 FQVVLEDT 48>NP_001071062 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LFQVSVEDT 9 L QVS EDT Sbjct: 65 LTQVSKEDT 73>NP_001091995 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QVSVEDT 9 +VS+EDT Sbjct: 532 EVSIEDT 538>NP_001158058 Length = 3708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 ++QV VED Sbjct: 287 IYQVKVED 294>NP_001025025 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 646 FQLTVKDT 653>NP_001025022 Length = 788 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 596 FQLTVKDT 603>NP_060674 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QVSVEDT 9 +VS+EDT Sbjct: 531 EVSIEDT 537>NP_003710 Length = 885 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 693 FQLTVKDT 700>NP_001025023 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 638 FQLTVKDT 645>XP_006720367 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LFQVSVEDT 9 L QVS EDT Sbjct: 65 LTQVSKEDT 73>XP_005266401 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QVSVEDT 9 +VS+EDT Sbjct: 484 EVSIEDT 490>XP_005266400 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QVSVEDT 9 +VS+EDT Sbjct: 526 EVSIEDT 532>XP_006715623 Length = 957 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSV+D Sbjct: 307 LLQVSVDD 314>XP_006715622 Length = 2499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSV+D Sbjct: 1849 LLQVSVDD 1856>XP_005267190 Length = 3424 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSV+D Sbjct: 2774 LLQVSVDD 2781>XP_005267189 Length = 3425 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSV+D Sbjct: 2788 LLQVSVDD 2795>XP_005267187 Length = 3433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSV+D Sbjct: 2783 LLQVSVDD 2790>XP_005267185 Length = 3437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSV+D Sbjct: 2787 LLQVSVDD 2794>XP_005267184 Length = 3438 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSV+D Sbjct: 2788 LLQVSVDD 2795>XP_005248681 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 591 FQLTVKDT 598>XP_005248680 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 592 FQLTVKDT 599>XP_006714790 Length = 859 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 667 FQLTVKDT 674>XP_005248678 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 692 FQLTVKDT 699>XP_006714789 Length = 905 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 713 FQLTVKDT 720>XP_006714788 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 714 FQLTVKDT 721>XP_006711681 Length = 3448 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 ++QV VED Sbjct: 287 IYQVKVED 294>XP_006711680 Length = 3617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 ++QV VED Sbjct: 287 IYQVKVED 294>XP_005245637 Length = 3683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 ++QV VED Sbjct: 287 IYQVKVED 294>NP_001025024 Length = 865 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FQVSVEDT 9 FQ++V+DT Sbjct: 673 FQLTVKDT 680>NP_009055 Length = 3433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LFQVSVED 8 L QVSV+D Sbjct: 2783 LLQVSVDD 2790>NP_001273615 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QVSVEDT 9 +VS+EDT Sbjct: 483 EVSIEDT 489>NP_001026 Length = 4967 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2111 VSVEDT 2116>NP_004357 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV+ ED+ Sbjct: 675 FQVNTEDS 682>NP_001164560 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV+ ED+ Sbjct: 675 FQVNTEDS 682>NP_001164559 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV+ ED+ Sbjct: 631 FQVNTEDS 638>NP_001164558 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV+ ED+ Sbjct: 658 FQVNTEDS 665>XP_005247181 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LFQVSVED 8 +F+V+VED Sbjct: 27 VFRVNVED 34>XP_006713553 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV+ ED+ Sbjct: 289 FQVNTEDS 296>XP_006713552 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV+ ED+ Sbjct: 675 FQVNTEDS 682>XP_006713551 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FQVSVEDT 9 FQV+ ED+ Sbjct: 649 FQVNTEDS 656>XP_006711873 Length = 4954 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2110 VSVEDT 2115>XP_006711872 Length = 2735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2121 VSVEDT 2126>XP_006711871 Length = 4906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2121 VSVEDT 2126>XP_006711870 Length = 4965 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2121 VSVEDT 2126>XP_006711869 Length = 4973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2121 VSVEDT 2126>XP_006711868 Length = 4975 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2111 VSVEDT 2116>XP_006711867 Length = 4977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2121 VSVEDT 2126>XP_006711866 Length = 4984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2120 VSVEDT 2125>XP_006711865 Length = 4985 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VSVEDT 9 VSVEDT Sbjct: 2121 VSVEDT 2126>NP_001862 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LFQVSVED 8 +F+V+VED Sbjct: 27 VFRVNVED 34Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.132 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 416,248 Number of extensions: 815 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |