Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_001137251 17 4312 NP_054774 17 4312 NP_001391 16 5631 NP_789744 16 5631 NP_036459 16 5631 XP_006710462 16 5631 NP_005468 16 7355 NP_060656 16 7355 NP_113598 16 7355 NP_114037 16 7355 NP_114036 16 7355 NP_114067 16 7355 NP_690605 16 7355 NP_061723 16 7355 NP_061728 16 7355 NP_061730 16 7355 NP_001273926 16 7355 NP_068769 16 7355 NP_061732 16 7355 NP_061725 16 7355 NP_113599 16 7355 NP_113688 16 7355 NP_113683 16 7355 XP_005262778 16 7355 XP_005245374 16 7355 XP_006710337 16 7355 NP_660287 16 7355 NP_114062 16 7355 NP_061734 16 7355 NP_114040 16 7355 NP_061733 16 7355 NP_113689 16 7355 NP_113684 16 7355 NP_061729 16 7355 NP_113685 16 7355 NP_061731 16 7355 NP_001013421 15 9605 NP_001171705 15 9605 NP_001171702 15 9605 NP_001171703 15 9605 NP_001171704 15 9605 XP_005261497 15 9605 XP_005261496 15 9605 XP_006724258 15 9605 NP_066938 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LFKRLYSL 8 LFKRLYSL Sbjct: 1059 LFKRLYSL 1066>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LFKRLYSL 8 LFKRLYSL Sbjct: 1059 LFKRLYSL 1066>NP_001137251 Length = 676 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFKRLYSLV 9 + K+LYSLV Sbjct: 489 MVKKLYSLV 497>NP_054774 Length = 676 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFKRLYSLV 9 + K+LYSLV Sbjct: 489 MVKKLYSLV 497>NP_001391 Length = 382 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFKRLYSLV 9 L+ R+YSLV Sbjct: 220 LYCRIYSLV 228>NP_789744 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LFKRLYSLV 9 LF+RL+S++ Sbjct: 706 LFQRLFSIL 714>NP_036459 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LFKRLYSLV 9 LF+RL+S++ Sbjct: 706 LFQRLFSIL 714>XP_006710462 Length = 382 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFKRLYSLV 9 L+ R+YSLV Sbjct: 220 LYCRIYSLV 228>NP_005468 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KRLYSL 8 KRLYSL Sbjct: 10 KRLYSL 15>NP_060656 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LFKRLYSL 8 LFK YSL Sbjct: 124 LFKEAYSL 131>NP_113598 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_114037 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_114036 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_114067 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 400 FKNYYSLV 407>NP_690605 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFKRLYSLV 9 LF+R+ SLV Sbjct: 30 LFRRMSSLV 38>NP_061723 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_061728 Length = 948 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_061730 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_001273926 Length = 102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FKRLYSLV 9 FK+LY+L+ Sbjct: 19 FKQLYTLM 26>NP_068769 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LFKRLYSLV 9 LF+R+ SLV Sbjct: 30 LFRRMSSLV 38>NP_061732 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_061725 Length = 949 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 400 FKNYYSLV 407>NP_113599 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_113688 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_113683 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>XP_005262778 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KRLYSLV 9 K+LYSL+ Sbjct: 179 KKLYSLI 185>XP_005245374 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LFKRLYSL 8 LFK YSL Sbjct: 182 LFKEAYSL 189>XP_006710337 Length = 102 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FKRLYSLV 9 FK+LY+L+ Sbjct: 19 FKQLYTLM 26>NP_660287 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KRLYSLV 9 K+LYSL+ Sbjct: 179 KKLYSLI 185>NP_114062 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_061734 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_114040 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_061733 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_113689 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 400 FKNYYSLV 407>NP_113684 Length = 808 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_061729 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_113685 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 401 FKNYYSLV 408>NP_061731 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FKRLYSLV 9 FK YSLV Sbjct: 400 FKNYYSLV 407>NP_001013421 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LFKRLYS 7 LFK LYS Sbjct: 212 LFKPLYS 218>NP_001171705 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFKRLY 6 L+KRLY Sbjct: 822 LYKRLY 827>NP_001171702 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFKRLY 6 L+KRLY Sbjct: 886 LYKRLY 891>NP_001171703 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFKRLY 6 L+KRLY Sbjct: 886 LYKRLY 891>NP_001171704 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFKRLY 6 L+KRLY Sbjct: 886 LYKRLY 891>XP_005261497 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFKRLY 6 L+KRLY Sbjct: 822 LYKRLY 827>XP_005261496 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFKRLY 6 L+KRLY Sbjct: 886 LYKRLY 891>XP_006724258 Length = 1022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFKRLY 6 L+KRLY Sbjct: 886 LYKRLY 891>NP_066938 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LFKRLY 6 L+KRLY Sbjct: 886 LYKRLY 891Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.157 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 480,574 Number of extensions: 914 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |