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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001245202                                                           19     869
NP_001245200                                                           19     869
NP_001161091                                                           19     869
NP_000240                                                              19     869
NP_001161090                                                           19     869
NP_001161089                                                           19     869
NP_001245203                                                           19     869
XP_005265223                                                           19     869
XP_005265221                                                           19     869
XP_005265220                                                           19     869
XP_005265218                                                           19     869
NP_078913                                                              17    4312
NP_001018125                                                           16    5631
NP_149075                                                              16    5631
XP_005277590                                                           16    5631
XP_006713088                                                           16    5631
XP_006713087                                                           16    5631
XP_005265003                                                           16    5631
XP_006713086                                                           16    5631
XP_006713085                                                           16    5631
XP_006713084                                                           16    5631
NP_775822                                                              16    7355
XP_006717062                                                           16    7355
XP_006717061                                                           16    7355
XP_005251851                                                           16    7355
XP_005251850                                                           16    7355

>NP_001245202
          Length = 515

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 341 LFDLAMLAL 349



>NP_001245200
          Length = 687

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 582 LFDLAMLAL 590



>NP_001161091
          Length = 515

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 341 LFDLAMLAL 349



>NP_000240
          Length = 756

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 582 LFDLAMLAL 590



>NP_001161090
          Length = 515

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 341 LFDLAMLAL 349



>NP_001161089
          Length = 658

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 484 LFDLAMLAL 492



>NP_001245203
          Length = 515

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 341 LFDLAMLAL 349



>XP_005265223
          Length = 415

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 241 LFDLAMLAL 249



>XP_005265221
          Length = 515

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 341 LFDLAMLAL 349



>XP_005265220
          Length = 515

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 341 LFDLAMLAL 349



>XP_005265218
          Length = 687

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFDLVMLAL 9
           LFDL MLAL
Sbjct: 513 LFDLAMLAL 521



>NP_078913
          Length = 486

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LFDLVMLA 8
           +FDLVM+A
Sbjct: 297 VFDLVMVA 304



>NP_001018125
          Length = 1451

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LFDLVML 7
           +FDLVML
Sbjct: 379 VFDLVML 385



>NP_149075
          Length = 1471

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LFDLVML 7
           +FDLVML
Sbjct: 379 VFDLVML 385



>XP_005277590
          Length = 900

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LFDLVML 7
           +FDLVML
Sbjct: 126 VFDLVML 132



>XP_006713088
          Length = 1382

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LFDLVML 7
           +FDLVML
Sbjct: 379 VFDLVML 385



>XP_006713087
          Length = 1432

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LFDLVML 7
           +FDLVML
Sbjct: 379 VFDLVML 385



>XP_005265003
          Length = 1451

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LFDLVML 7
           +FDLVML
Sbjct: 379 VFDLVML 385



>XP_006713086
          Length = 1458

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LFDLVML 7
           +FDLVML
Sbjct: 379 VFDLVML 385



>XP_006713085
          Length = 1471

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LFDLVML 7
           +FDLVML
Sbjct: 379 VFDLVML 385



>XP_006713084
          Length = 1471

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   LFDLVML 7
           +FDLVML
Sbjct: 379 VFDLVML 385



>NP_775822
          Length = 871

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   FDLVML 7
           FDLVML
Sbjct: 397 FDLVML 402



>XP_006717062
          Length = 828

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   FDLVML 7
           FDLVML
Sbjct: 339 FDLVML 344



>XP_006717061
          Length = 872

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   FDLVML 7
           FDLVML
Sbjct: 397 FDLVML 402



>XP_005251851
          Length = 885

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   FDLVML 7
           FDLVML
Sbjct: 397 FDLVML 402



>XP_005251850
          Length = 886

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   FDLVML 7
           FDLVML
Sbjct: 397 FDLVML 402



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.353    0.165    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 259,154
Number of extensions: 233
Number of successful extensions: 26
Number of sequences better than 10000.0: 26
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 26
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.9 bits)
S2: 28 (15.4 bits)