Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 509 NP_671714 20 509 XP_006715890 20 509 XP_005250160 20 509 XP_005250159 20 509 NP_060921 18 1935 NP_055619 17 2528 XP_006721674 17 2528 XP_006721673 17 2528 XP_006721672 17 2528 XP_005256939 17 2528 XP_005256938 17 2528 NP_001243415 17 3301 NP_001243417 17 3301 NP_004478 17 3301 NP_001243416 17 3301 NP_057427 17 3301 XP_006713654 17 3301 XP_006713653 17 3301 XP_005247430 17 3301 XP_005247429 17 3301 XP_006713652 17 3301 XP_006713651 17 3301 XP_006713650 17 3301 XP_005247428 17 3301 NP_001073964 17 4312 XP_006715861 17 4312 XP_006715860 17 4312 NP_000869 16 5631 NP_006222 16 5631 NP_001010906 16 5631 NP_001157968 16 5631 XP_005273560 16 5631 XP_005273558 16 5631 XP_005247674 16 5631 XP_006713761 16 5631 XP_006713760 16 5631 XP_006713759 16 5631 NP_065986 16 7355 NP_149079 16 7355 NP_001257697 16 7355 XP_006726478 16 7355 XP_006714496 16 7355 XP_005264824 16 7355 XP_005246782 16 7355 XP_005246781 16 7355 XP_005246780 16 7355 XP_005246779 16 7355 XP_005246778 16 7355 XP_005246777 16 7355 XP_005246776 16 7355 XP_006712723 16 7355 XP_006712722 16 7355 XP_005246775 16 7355 XP_005246419 16 7355 XP_006711057 16 7355 XP_006710224 16 7355 NP_938012 16 7355 NP_803237 16 7355 NP_079452 15 9605 NP_078838 15 9605 XP_006723617 15 9605 XP_005260737 15 9605 XP_005260736 15 9605 XP_006723616 15 9605 XP_006723615 15 9605 XP_005260735 15 9605>NP_005742 Length = 3907 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEVTKRDKL 9 LEVTKR+KL Sbjct: 945 LEVTKREKL 953>NP_671714 Length = 3899 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEVTKRDKL 9 LEVTKR+KL Sbjct: 945 LEVTKREKL 953>XP_006715890 Length = 3860 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEVTKRDKL 9 LEVTKR+KL Sbjct: 945 LEVTKREKL 953>XP_005250160 Length = 3939 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEVTKRDKL 9 LEVTKR+KL Sbjct: 945 LEVTKREKL 953>XP_005250159 Length = 3952 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LEVTKRDKL 9 LEVTKR+KL Sbjct: 945 LEVTKREKL 953>NP_060921 Length = 1338 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LEV K+DKL Sbjct: 1063 LEVEKKDKL 1071>NP_055619 Length = 967 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EVTKRDKL 9 EVTK+D+L Sbjct: 235 EVTKKDRL 242>XP_006721674 Length = 825 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EVTKRDKL 9 EVTK+D+L Sbjct: 235 EVTKKDRL 242>XP_006721673 Length = 967 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EVTKRDKL 9 EVTK+D+L Sbjct: 235 EVTKKDRL 242>XP_006721672 Length = 967 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EVTKRDKL 9 EVTK+D+L Sbjct: 235 EVTKKDRL 242>XP_005256939 Length = 967 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EVTKRDKL 9 EVTK+D+L Sbjct: 235 EVTKKDRL 242>XP_005256938 Length = 967 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EVTKRDKL 9 EVTK+D+L Sbjct: 235 EVTKKDRL 242>NP_001243415 Length = 3269 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 878 LEITKMDQL 886>NP_001243417 Length = 3184 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 798 LEITKMDQL 806>NP_004478 Length = 3259 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 873 LEITKMDQL 881>NP_001243416 Length = 3225 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 839 LEITKMDQL 847>NP_057427 Length = 3114 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK DK+ Sbjct: 2597 LELTKMDKM 2605>XP_006713654 Length = 3189 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 798 LEITKMDQL 806>XP_006713653 Length = 3223 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 837 LEITKMDQL 845>XP_005247430 Length = 3228 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 837 LEITKMDQL 845>XP_005247429 Length = 3230 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 839 LEITKMDQL 847>XP_006713652 Length = 3263 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 872 LEITKMDQL 880>XP_006713651 Length = 3264 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 873 LEITKMDQL 881>XP_006713650 Length = 3264 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 878 LEITKMDQL 886>XP_005247428 Length = 3269 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+TK D+L Sbjct: 878 LEITKMDQL 886>NP_001073964 Length = 2968 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 L +TK+DKL Sbjct: 1634 LSLTKQDKL 1642>XP_006715861 Length = 2189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 L +TK+DKL Sbjct: 1634 LSLTKQDKL 1642>XP_006715860 Length = 2968 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 L +TK+DKL Sbjct: 1634 LSLTKQDKL 1642>NP_000869 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LEV +RDK+ Sbjct: 325 LEVLERDKV 333>NP_006222 Length = 2286 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 +E+T+RD L Sbjct: 255 VEITRRDDL 263>NP_001010906 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVTKRDKL 9 L VTK DKL Sbjct: 351 LVVTKMDKL 359>NP_001157968 Length = 1854 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+ KRD++ Sbjct: 1352 LEIMKRDEI 1360>XP_005273560 Length = 672 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVTKRDKL 9 L VTK DKL Sbjct: 227 LVVTKMDKL 235>XP_005273558 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVTKRDKL 9 L VTK DKL Sbjct: 351 LVVTKMDKL 359>XP_005247674 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+ KRD++ Sbjct: 587 LEIMKRDEI 595>XP_006713761 Length = 1554 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+ KRD++ Sbjct: 1052 LEIMKRDEI 1060>XP_006713760 Length = 1847 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+ KRD++ Sbjct: 1345 LEIMKRDEI 1353>XP_006713759 Length = 1898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 LE+ KRD++ Sbjct: 1396 LEIMKRDEI 1404>NP_065986 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 713 LEISKRD 719>NP_149079 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 LEVT R+K Sbjct: 133 LEVTAREK 140>NP_001257697 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 LEVT R+K Sbjct: 38 LEVTAREK 45>XP_006726478 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE+TK+D Sbjct: 127 LEITKQD 133>XP_006714496 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE+TK+D Sbjct: 127 LEITKQD 133>XP_005264824 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 +E+T RD+L Sbjct: 530 VEITPRDQL 538>XP_005246782 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 465 LEISKRD 471>XP_005246781 Length = 957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 691 LEISKRD 697>XP_005246780 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 691 LEISKRD 697>XP_005246779 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 713 LEISKRD 719>XP_005246778 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 713 LEISKRD 719>XP_005246777 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 713 LEISKRD 719>XP_005246776 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 713 LEISKRD 719>XP_006712723 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 713 LEISKRD 719>XP_006712722 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 713 LEISKRD 719>XP_005246775 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE++KRD Sbjct: 713 LEISKRD 719>XP_005246419 Length = 743 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 LEV KRD+ Sbjct: 312 LEVLKRDQ 319>XP_006711057 Length = 838 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 LEVT R+K Sbjct: 134 LEVTAREK 141>XP_006710224 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LEVTKRD 7 LE+TK+D Sbjct: 127 LEITKQD 133>NP_938012 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEVTKRDKL 9 +E+T RD+L Sbjct: 530 VEITPRDQL 538>NP_803237 Length = 826 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 LEV KRD+ Sbjct: 395 LEVLKRDQ 402>NP_079452 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 +EV K+DK Sbjct: 1121 IEVLKKDK 1128>NP_078838 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEVTKRDKL 9 L+VTK D L Sbjct: 38 LQVTKHDVL 46>XP_006723617 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 +EV K+DK Sbjct: 501 IEVLKKDK 508>XP_005260737 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 +EV K+DK Sbjct: 754 IEVLKKDK 761>XP_005260736 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 +EV K+DK Sbjct: 772 IEVLKKDK 779>XP_006723616 Length = 1223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 +EV K+DK Sbjct: 962 IEVLKKDK 969>XP_006723615 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 +EV K+DK Sbjct: 1121 IEVLKKDK 1128>XP_005260735 Length = 1398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LEVTKRDK 8 +EV K+DK Sbjct: 1137 IEVLKKDK 1144Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.134 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 473,763 Number of extensions: 815 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |