Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 17 2528 XP_006714104 17 2528 XP_005265800 17 2528 XP_006714103 17 2528 XP_006714102 17 2528 NP_001032961 17 3301 NP_057400 17 3301 XP_006712656 17 3301 XP_005264025 17 3301 XP_006712655 17 3301 NP_006729 16 5631 NP_001257475 16 5631 NP_009131 16 5631 NP_055833 16 5631 NP_001186871 16 5631 XP_005254913 16 5631 XP_005254912 16 5631 XP_005254911 16 5631 XP_005254910 16 5631 XP_005254909 16 5631 XP_005254908 16 5631 XP_005254907 16 5631 XP_005254906 16 5631 XP_005254905 16 5631 XP_005254904 16 5631 XP_005254903 16 5631 XP_005254902 16 5631 XP_005254901 16 5631 XP_005254900 16 5631 XP_005254899 16 5631 XP_005254898 16 5631 XP_005254897 16 5631 XP_006720441 16 5631 XP_006720440 16 5631 XP_006720439 16 5631 XP_005254896 16 5631 XP_006715464 16 5631 XP_006715463 16 5631 XP_006715462 16 5631 XP_006715461 16 5631 XP_006715460 16 5631 XP_006715459 16 5631 XP_006715458 16 5631 XP_006715457 16 5631 XP_006715456 16 5631 NP_064522 16 7355 XP_005272685 16 7355>NP_006197 Length = 1089 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSASA Sbjct: 85 LEVSSASA 92>XP_006714104 Length = 832 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSASA Sbjct: 110 LEVSSASA 117>XP_005265800 Length = 1089 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSASA Sbjct: 85 LEVSSASA 92>XP_006714103 Length = 1111 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSASA Sbjct: 107 LEVSSASA 114>XP_006714102 Length = 1114 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSASA Sbjct: 110 LEVSSASA 117>NP_001032961 Length = 1250 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEVSSASAT 9 LE+SSAS T Sbjct: 878 LEISSASRT 886>NP_057400 Length = 1251 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEVSSASAT 9 LE+SSAS T Sbjct: 879 LEISSASRT 887>XP_006712656 Length = 761 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEVSSASAT 9 LE+SSAS T Sbjct: 389 LEISSASRT 397>XP_005264025 Length = 1181 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEVSSASAT 9 LE+SSAS T Sbjct: 809 LEISSASRT 817>XP_006712655 Length = 1251 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEVSSASAT 9 LE+SSAS T Sbjct: 879 LEISSASRT 887>NP_006729 Length = 2817 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1624 LEVSSANA 1631>NP_001257475 Length = 1434 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 242 LEVSSANA 249>NP_009131 Length = 2813 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1620 LEVSSANA 1627>NP_055833 Length = 2465 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1164 LEVESASVT 1172>NP_001186871 Length = 2476 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1155 LEVESASVT 1163>XP_005254913 Length = 1441 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 242 LEVSSANA 249>XP_005254912 Length = 1442 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 242 LEVSSANA 249>XP_005254911 Length = 1473 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 273 LEVSSANA 280>XP_005254910 Length = 1523 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 282 LEVSSANA 289>XP_005254909 Length = 1536 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 295 LEVSSANA 302>XP_005254908 Length = 1536 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 295 LEVSSANA 302>XP_005254907 Length = 2590 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1349 LEVSSANA 1356>XP_005254906 Length = 2675 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1434 LEVSSANA 1441>XP_005254905 Length = 2793 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1602 LEVSSANA 1609>XP_005254904 Length = 2802 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1602 LEVSSANA 1609>XP_005254903 Length = 2820 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1620 LEVSSANA 1627>XP_005254902 Length = 2835 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1642 LEVSSANA 1649>XP_005254901 Length = 2842 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1642 LEVSSANA 1649>XP_005254900 Length = 2843 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1602 LEVSSANA 1609>XP_005254899 Length = 2861 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1620 LEVSSANA 1627>XP_005254898 Length = 2874 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1642 LEVSSANA 1649>XP_005254897 Length = 2876 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1642 LEVSSANA 1649>XP_006720441 Length = 2881 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1642 LEVSSANA 1649>XP_006720440 Length = 2882 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1642 LEVSSANA 1649>XP_006720439 Length = 2882 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1642 LEVSSANA 1649>XP_005254896 Length = 2883 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LEVSSASA 8 LEVSSA+A Sbjct: 1642 LEVSSANA 1649>XP_006715464 Length = 2027 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1164 LEVESASVT 1172>XP_006715463 Length = 2434 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1164 LEVESASVT 1172>XP_006715462 Length = 2452 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1131 LEVESASVT 1139>XP_006715461 Length = 2456 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1155 LEVESASVT 1163>XP_006715460 Length = 2465 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1164 LEVESASVT 1172>XP_006715459 Length = 2475 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1154 LEVESASVT 1162>XP_006715458 Length = 2476 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1155 LEVESASVT 1163>XP_006715457 Length = 2485 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1164 LEVESASVT 1172>XP_006715456 Length = 2485 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEVSSASAT 9 LEV SAS T Sbjct: 1164 LEVESASVT 1172>NP_064522 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LEVSSAS 7 LEVSSAS Sbjct: 732 LEVSSAS 738>XP_005272685 Length = 815 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LEVSSAS 7 LEVSSAS Sbjct: 706 LEVSSAS 712Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.280 0.0912 0.183 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 203,863 Number of extensions: 145 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |