Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_085126 17 4312 NP_001136116 17 4312 NP_060804 17 4312 XP_006712841 17 4312 XP_006712840 17 4312 NP_001093128 17 4312 NP_001093130 17 4312 NP_982272 16 5631 NP_001273575 16 5631 NP_001177387 16 5631 NP_001180465 16 5631 NP_056100 16 5631 NP_443066 16 5631 XP_005266731 16 5631 XP_006722494 16 5631 NP_065924 16 7355 NP_963924 16 7355 XP_005265408 16 7355 XP_006711179 16 7355 XP_006711178 16 7355 XP_005244884 16 7355 NP_006329 16 7355 NP_001275929 15 9605 NP_001275930 15 9605 NP_705837 15 9605 NP_055504 15 9605 NP_001277192 15 9605 NP_037523 15 9605 XP_006724226 15 9605 XP_006724225 15 9605 XP_006714661 15 9605 XP_006714660 15 9605 XP_006712687 15 9605 XP_006712686 15 9605 XP_006712685 15 9605 XP_006712684 15 9605 XP_006712683 15 9605 XP_006712682 15 9605 XP_006712681 15 9605 XP_005246730 15 9605 XP_005246729 15 9605 XP_006712680 15 9605 XP_006712679 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LESIAMYDI 9 LESIAM+DI Sbjct: 1298 LESIAMHDI 1306>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LESIAMYDI 9 LESIAM+DI Sbjct: 1298 LESIAMHDI 1306>NP_085126 Length = 1671 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LESIAMYDI 9 LES MYD+ Sbjct: 13 LESSRMYDV 21>NP_001136116 Length = 1700 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LESIAMYDI 9 LES MYD+ Sbjct: 13 LESSRMYDV 21>NP_060804 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LESI+ YD Sbjct: 238 LESISFYD 245>XP_006712841 Length = 1696 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LESIAMYDI 9 LES MYD+ Sbjct: 38 LESSRMYDV 46>XP_006712840 Length = 1725 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LESIAMYDI 9 LES MYD+ Sbjct: 38 LESSRMYDV 46>NP_001093128 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LESI+ YD Sbjct: 238 LESISFYD 245>NP_001093130 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LESI+ YD Sbjct: 238 LESISFYD 245>NP_982272 Length = 2099 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 SIA+YD+ Sbjct: 287 SIALYDV 293>NP_001273575 Length = 808 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LESI +YD Sbjct: 787 LESIFLYD 794>NP_001177387 Length = 1999 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 SIA+YD+ Sbjct: 219 SIALYDV 225>NP_001180465 Length = 2031 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 SIA+YD+ Sbjct: 219 SIALYDV 225>NP_056100 Length = 1490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YDI Sbjct: 1376 SVALYDI 1382>NP_443066 Length = 1457 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YDI Sbjct: 1343 SVALYDI 1349>XP_005266731 Length = 982 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YDI Sbjct: 868 SVALYDI 874>XP_006722494 Length = 1490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YDI Sbjct: 1376 SVALYDI 1382>NP_065924 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LES++ YD Sbjct: 241 LESLSFYD 248>NP_963924 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LES++ YD Sbjct: 239 LESLSFYD 246>XP_005265408 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LES++ YD Sbjct: 241 LESLSFYD 248>XP_006711179 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LES++ YD Sbjct: 239 LESLSFYD 246>XP_006711178 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LES++ YD Sbjct: 239 LESLSFYD 246>XP_005244884 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LES++ YD Sbjct: 239 LESLSFYD 246>NP_006329 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LESIAMYD 8 LES++ YD Sbjct: 239 LESLSFYD 246>NP_001275929 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ESIAMYDI 9 + +AMYD+ Sbjct: 261 DRLAMYDV 268>NP_001275930 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ESIAMYDI 9 + +AMYD+ Sbjct: 261 DRLAMYDV 268>NP_705837 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ESIAMYDI 9 + +AMYD+ Sbjct: 270 DRLAMYDV 277>NP_055504 Length = 2186 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 426 SVALYDL 432>NP_001277192 Length = 2180 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 420 SVALYDL 426>NP_037523 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 ESIAMYD 8 +S+A+YD Sbjct: 690 DSVALYD 696>XP_006724226 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ESIAMYDI 9 + +AMYD+ Sbjct: 261 DRLAMYDV 268>XP_006724225 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ESIAMYDI 9 + +AMYD+ Sbjct: 261 DRLAMYDV 268>XP_006714661 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 ESIAMYD 8 +S+A+YD Sbjct: 310 DSVALYD 316>XP_006714660 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 ESIAMYD 8 +S+A+YD Sbjct: 690 DSVALYD 696>XP_006712687 Length = 2166 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712686 Length = 2173 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712685 Length = 2175 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712684 Length = 2189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 420 SVALYDL 426>XP_006712683 Length = 2195 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 426 SVALYDL 432>XP_006712682 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712681 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_005246730 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_005246729 Length = 2201 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712680 Length = 2206 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712679 Length = 2208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIAMYDI 9 S+A+YD+ Sbjct: 439 SVALYDL 445Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.140 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 316,312 Number of extensions: 325 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |