Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001103467 17 4312 XP_005267404 17 4312 NP_003792 17 4312 NP_005518 16 5631 NP_005337 16 5631 NP_071324 16 5631 NP_005336 16 5631 NP_002146 16 5631 NP_078928 16 5631 XP_005275459 16 5631 XP_005275458 16 5631 XP_005275456 16 5631 XP_005275031 16 5631 XP_005275030 16 5631 XP_005275027 16 5631 XP_005272874 16 5631 XP_005272873 16 5631 XP_005272870 16 5631 XP_005274919 16 5631 XP_005274918 16 5631 XP_005274916 16 5631 XP_005255036 16 5631 XP_005249128 16 5631 XP_005249130 16 5631 XP_005249127 16 5631 NP_004624 16 7355 NP_796375 16 7355 XP_005259729 16 7355 XP_005259728 16 7355 XP_006712799 16 7355 XP_006712798 16 7355 XP_006712797 16 7355 XP_006712796 16 7355 NP_001128129 16 7355 NP_001230526 15 9605 NP_058648 15 9605 NP_001245221 15 9605 NP_036472 15 9605 NP_001129493 15 9605 NP_001245226 15 9605 NP_775114 15 9605 NP_001245223 15 9605 NP_001245225 15 9605 NP_001245224 15 9605 XP_006726566 15 9605 XP_005260470 15 9605 XP_006717411 15 9605 XP_001716413 15 9605 XP_006710279 15 9605>NP_001103467 Length = 533 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EMAPLSLA 9 EMAPLS A Sbjct: 304 EMAPLSQA 311>XP_005267404 Length = 797 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EMAPLSLA 9 EMAPLS A Sbjct: 568 EMAPLSQA 575>NP_003792 Length = 621 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEMAPLSLA 9 L+ APLSLA Sbjct: 567 LQEAPLSLA 575>NP_005518 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>NP_005337 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 394 LDVAPLSL 401>NP_071324 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 +E+APLS+ Sbjct: 307 IELAPLSM 314>NP_005336 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 394 LDVAPLSL 401>NP_002146 Length = 643 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>NP_078928 Length = 2015 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LEMAPLS 7 LE+APLS Sbjct: 1334 LELAPLS 1340>XP_005275459 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005275458 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005275456 Length = 705 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 460 LDVAPLSL 467>XP_005275031 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005275030 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005275027 Length = 705 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 460 LDVAPLSL 467>XP_005272874 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005272873 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005272870 Length = 705 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 460 LDVAPLSL 467>XP_005274919 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005274918 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005274916 Length = 705 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 460 LDVAPLSL 467>XP_005255036 Length = 1310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LEMAPLS 7 LE+APLS Sbjct: 629 LELAPLS 635>XP_005249128 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005249130 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 396 LDVAPLSL 403>XP_005249127 Length = 705 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 L++APLSL Sbjct: 460 LDVAPLSL 467>NP_004624 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MAPLSLA 9 +APLSLA Sbjct: 354 LAPLSLA 360>NP_796375 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EMAPLSLA 9 E AP+SLA Sbjct: 27 EAAPMSLA 34>XP_005259729 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EMAPLSLA 9 E AP+SLA Sbjct: 27 EAAPMSLA 34>XP_005259728 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EMAPLSLA 9 E AP+SLA Sbjct: 27 EAAPMSLA 34>XP_006712799 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MAPLSLA 9 +APLSLA Sbjct: 379 LAPLSLA 385>XP_006712798 Length = 313 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MAPLSLA 9 +APLSLA Sbjct: 269 LAPLSLA 275>XP_006712797 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MAPLSLA 9 +APLSLA Sbjct: 354 LAPLSLA 360>XP_006712796 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MAPLSLA 9 +APLSLA Sbjct: 358 LAPLSLA 364>NP_001128129 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 LE+AP+S+ Sbjct: 80 LELAPMSV 87>NP_001230526 Length = 1287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LEMAPLS 7 LEM PLS Sbjct: 1147 LEMKPLS 1153>NP_058648 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LEMAPLS 7 LEM PLS Sbjct: 1147 LEMKPLS 1153>NP_001245221 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 L APLSLA Sbjct: 750 LMAAPLSLA 758>NP_036472 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 L APLSLA Sbjct: 770 LMAAPLSLA 778>NP_001129493 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 L APLSLA Sbjct: 750 LMAAPLSLA 758>NP_001245226 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 L APLSLA Sbjct: 551 LMAAPLSLA 559>NP_775114 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 L APLSLA Sbjct: 770 LMAAPLSLA 778>NP_001245223 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 L APLSLA Sbjct: 551 LMAAPLSLA 559>NP_001245225 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 L APLSLA Sbjct: 551 LMAAPLSLA 559>NP_001245224 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 L APLSLA Sbjct: 551 LMAAPLSLA 559>XP_006726566 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 +EMAPL A Sbjct: 419 MEMAPLGPA 427>XP_005260470 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 L APLSLA Sbjct: 769 LMAAPLSLA 777>XP_006717411 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 +EMAPL A Sbjct: 419 MEMAPLGPA 427>XP_001716413 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LEMAPLSL 8 +E+APL+L Sbjct: 496 VELAPLTL 503>XP_006710279 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEMAPLSLA 9 +EMAPL A Sbjct: 419 MEMAPLGPA 427Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.128 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 517,401 Number of extensions: 545 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |