Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1482 NP_001185763 18 1482 NP_055459 18 1482 XP_006726436 18 1482 XP_006726410 18 1482 XP_006711784 18 1482 XP_006711719 18 1482 XP_006711718 18 1482 XP_006711717 18 1482 XP_006711716 18 1482 XP_006711715 18 1482 XP_006711714 18 1482 XP_006711713 18 1482 XP_006711712 18 1482 XP_006711711 18 1482 XP_006711710 18 1482 XP_006711709 18 1482 XP_005277503 18 1482 XP_005273038 18 1482 XP_006711708 18 1482 XP_005277500 18 1482 XP_006711707 18 1482 XP_005277499 18 1482 XP_006711706 18 1482 XP_006711705 18 1482 XP_006711164 18 1482 XP_005276114 18 1482 XP_006710122 18 1482 NP_005362 17 3301 XP_005268930 17 3301 NP_001934 17 4312 NP_079390 16 5631 NP_001129243 16 5631 NP_817123 16 5631 NP_002942 16 5631 XP_006723915 16 5631 XP_006723914 16 5631 XP_005260548 16 5631 XP_006723913 16 5631 XP_006723912 16 5631 XP_006719673 16 5631 XP_005269218 16 5631 XP_005269217 16 5631 XP_006719672 16 5631 XP_005269215 16 5631 NP_001127925 16 5631 NP_060788 16 7355 NP_055931 16 7355 NP_001157683 16 7355 NP_612208 16 7355 NP_001257810 16 7355 NP_001257809 16 7355 NP_001157685 16 7355 XP_005253473 16 7355 XP_005253472 16 7355 XP_005253471 16 7355 XP_005253470 16 7355 XP_006719168 16 7355 XP_006719167 16 7355 XP_006719166 16 7355 XP_006714056 16 7355 XP_005248108 16 7355 XP_005248109 16 7355 XP_006714055 16 7355 NP_001248348 15 9605 NP_004624 15 9605 XP_006712799 15 9605 XP_006712798 15 9605 XP_006712797 15 9605 XP_006712796 15 9605>NP_001185761 Length = 2240 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2174 LELRTKVSK 2182>NP_001185763 Length = 2362 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2280 LELRTKVSK 2288>NP_055459 Length = 2346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2280 LELRTKVSK 2288>XP_006726436 Length = 178 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 58 LELRTKVSK 66>XP_006726410 Length = 2087 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2021 LELRTKVSK 2029>XP_006711784 Length = 178 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 58 LELRTKVSK 66>XP_006711719 Length = 2302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2236 LELRTKVSK 2244>XP_006711718 Length = 1436 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 1287 LELRTKVSK 1295>XP_006711717 Length = 2385 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2236 LELRTKVSK 2244>XP_006711716 Length = 2411 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2345 LELRTKVSK 2353>XP_006711715 Length = 2428 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2279 LELRTKVSK 2287>XP_006711714 Length = 2429 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2280 LELRTKVSK 2288>XP_006711713 Length = 2432 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2283 LELRTKVSK 2291>XP_006711712 Length = 2473 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2324 LELRTKVSK 2332>XP_006711711 Length = 2482 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2333 LELRTKVSK 2341>XP_006711710 Length = 2494 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2345 LELRTKVSK 2353>XP_006711709 Length = 2495 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2346 LELRTKVSK 2354>XP_005277503 Length = 2498 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2443 LELRTKVSK 2451>XP_005273038 Length = 2509 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2443 LELRTKVSK 2451>XP_006711708 Length = 2512 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2363 LELRTKVSK 2371>XP_005277500 Length = 2525 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2443 LELRTKVSK 2451>XP_006711707 Length = 2553 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2404 LELRTKVSK 2412>XP_005277499 Length = 2561 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2443 LELRTKVSK 2451>XP_006711706 Length = 2591 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2442 LELRTKVSK 2450>XP_006711705 Length = 2592 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2443 LELRTKVSK 2451>XP_006711164 Length = 2087 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 2021 LELRTKVSK 2029>XP_005276114 Length = 134 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 28 LELRTKVSK 36>XP_006710122 Length = 126 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 LELR KVSK Sbjct: 58 LELRTKVSK 66>NP_005362 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 LE+R+KVS Sbjct: 106 LEIRVKVS 113>XP_005268930 Length = 233 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 LE+R+KVS Sbjct: 63 LEIRVKVS 70>NP_001934 Length = 1118 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LELRIKV 7 LELRIKV Sbjct: 143 LELRIKV 149>NP_079390 Length = 2479 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 +EL+++VSK Sbjct: 1146 MELKVEVSK 1154>NP_001129243 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +ELR+K+S Sbjct: 331 VELRVKIS 338>NP_817123 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELRIKV 7 LELR+KV Sbjct: 141 LELRVKV 147>NP_002942 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +ELR+K+S Sbjct: 363 VELRVKIS 370>XP_006723915 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +ELR+K+S Sbjct: 379 VELRVKIS 386>XP_006723914 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +ELR+K+S Sbjct: 379 VELRVKIS 386>XP_005260548 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +ELR+K+S Sbjct: 363 VELRVKIS 370>XP_006723913 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +ELR+K+S Sbjct: 379 VELRVKIS 386>XP_006723912 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +ELR+K+S Sbjct: 379 VELRVKIS 386>XP_006719673 Length = 1997 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 +EL+++VSK Sbjct: 664 MELKVEVSK 672>XP_005269218 Length = 2009 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 +EL+++VSK Sbjct: 676 MELKVEVSK 684>XP_005269217 Length = 2353 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 +EL+++VSK Sbjct: 1177 MELKVEVSK 1185>XP_006719672 Length = 2510 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 +EL+++VSK Sbjct: 1177 MELKVEVSK 1185>XP_005269215 Length = 2510 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 +EL+++VSK Sbjct: 1177 MELKVEVSK 1185>NP_001127925 Length = 1059 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LELRIKV 7 LELR+KV Sbjct: 141 LELRVKV 147>NP_060788 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 LE+++KVS+ Sbjct: 141 LEIKLKVSE 149>NP_055931 Length = 728 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +E+R+KVS Sbjct: 590 IEMRLKVS 597>NP_001157683 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +E+R+KVS Sbjct: 625 IEMRLKVS 632>NP_612208 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 LELR+K K Sbjct: 245 LELRVKTVK 253>NP_001257810 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 LELR+K K Sbjct: 175 LELRVKTVK 183>NP_001257809 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 LELR+K K Sbjct: 211 LELRVKTVK 219>NP_001157685 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LELRIKVS 8 +E+R+KVS Sbjct: 590 IEMRLKVS 597>XP_005253473 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 LE+++KVS+ Sbjct: 111 LEIKLKVSE 119>XP_005253472 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 LE+++KVS+ Sbjct: 111 LEIKLKVSE 119>XP_005253471 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 LE+++KVS+ Sbjct: 141 LEIKLKVSE 149>XP_005253470 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 LE+++KVS+ Sbjct: 141 LEIKLKVSE 149>XP_006719168 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 LE+++KVS+ Sbjct: 141 LEIKLKVSE 149>XP_006719167 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 LE+++KVS+ Sbjct: 141 LEIKLKVSE 149>XP_006719166 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LELRIKVSK 9 LE+++KVS+ Sbjct: 149 LEIKLKVSE 157>XP_006714056 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 LELR+K K Sbjct: 175 LELRVKTVK 183>XP_005248108 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 LELR+K K Sbjct: 245 LELRVKTVK 253>XP_005248109 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 LELR+K K Sbjct: 245 LELRVKTVK 253>XP_006714055 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 LELR+K K Sbjct: 245 LELRVKTVK 253>NP_001248348 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 +ELRIK K Sbjct: 224 IELRIKKKK 232>NP_004624 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 +ELRIK K Sbjct: 224 IELRIKKKK 232>XP_006712799 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 +ELRIK K Sbjct: 249 IELRIKKKK 257>XP_006712798 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 +ELRIK K Sbjct: 139 IELRIKKKK 147>XP_006712797 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LELRIKVSK 9 +ELRIK K Sbjct: 224 IELRIKKKK 232>XP_006712796 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LELRIKVSK 9 +ELRIK S+ Sbjct: 249 IELRIKRSR 257Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.139 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 337,386 Number of extensions: 416 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |