Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 18 1482 NP_858045 18 1482 NP_006525 18 1482 NP_001167559 18 1482 NP_653306 17 3301 NP_001273488 17 3301 NP_005302 17 4312 NP_001001549 17 4312 XP_006715767 17 4312 XP_006715766 17 4312 XP_005271818 17 4312 XP_005271817 17 4312 NP_149082 16 5631 NP_148977 16 5631 NP_006022 16 5631 NP_065768 16 5631 XP_006724654 16 5631 XP_006724653 16 5631 XP_005261186 16 5631 XP_005261185 16 5631 XP_005261184 16 5631 XP_005261183 16 5631 XP_005261182 16 5631 XP_005261181 16 5631 NP_057427 16 7355 NP_078997 16 7355 NP_055464 16 7355 NP_002214 16 7355 NP_079113 16 7355 XP_006720758 16 7355 XP_006720757 16 7355 XP_006720756 16 7355 XP_006719127 16 7355 NP_005742 15 9605 NP_671714 15 9605 NP_689637 15 9605 NP_002461 15 9605 NP_001243888 15 9605 NP_001277 15 9605 NP_113602 15 9605 NP_001247434 15 9605 NP_006187 15 9605 NP_116562 15 9605 NP_001247433 15 9605 NP_056254 15 9605 NP_219479 15 9605 NP_061938 15 9605 XP_006726617 15 9605 XP_005262298 15 9605 XP_006721591 15 9605 XP_006721263 15 9605 XP_006720409 15 9605 XP_006715890 15 9605 XP_005250160 15 9605 XP_005250159 15 9605 XP_006715821 15 9605 XP_005249868 15 9605 XP_006710039 15 9605>NP_001167558 Length = 1423 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LEDINAS E Sbjct: 208 LEDINASPE 216>NP_858045 Length = 1424 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LEDINAS E Sbjct: 208 LEDINASPE 216>NP_006525 Length = 1420 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LEDINAS E Sbjct: 208 LEDINASPE 216>NP_001167559 Length = 1415 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LEDINAS E Sbjct: 208 LEDINASPE 216>NP_653306 Length = 435 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LEDI+ SLE Sbjct: 393 LEDIHMSLE 401>NP_001273488 Length = 253 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LEDI+ SLE Sbjct: 211 LEDIHMSLE 219>NP_005302 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 + D+NASLE Sbjct: 56 VNDMNASLE 64>NP_001001549 Length = 548 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 + D+NASLE Sbjct: 56 VNDMNASLE 64>XP_006715767 Length = 588 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 + D+NASLE Sbjct: 50 VNDMNASLE 58>XP_006715766 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 + D+NASLE Sbjct: 56 VNDMNASLE 64>XP_005271818 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 + D+NASLE Sbjct: 56 VNDMNASLE 64>XP_005271817 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 + D+NASLE Sbjct: 56 VNDMNASLE 64>NP_149082 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 ++D+N SLE Sbjct: 251 IQDVNYSLE 259>NP_148977 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 ++D+N SLE Sbjct: 277 IQDVNYSLE 285>NP_006022 Length = 3336 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LE++ ASLE Sbjct: 2687 LEELRASLE 2695>NP_065768 Length = 1493 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LEDINAS 7 LEDINA+ Sbjct: 1336 LEDINAN 1342>XP_006724654 Length = 1335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LEDINAS 7 LEDINA+ Sbjct: 1178 LEDINAN 1184>XP_006724653 Length = 1377 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LEDINAS 7 LEDINA+ Sbjct: 1220 LEDINAN 1226>XP_005261186 Length = 3139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LE++ ASLE Sbjct: 2569 LEELRASLE 2577>XP_005261185 Length = 3229 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LE++ ASLE Sbjct: 2580 LEELRASLE 2588>XP_005261184 Length = 3258 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LE++ ASLE Sbjct: 2698 LEELRASLE 2706>XP_005261183 Length = 3268 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LE++ ASLE Sbjct: 2698 LEELRASLE 2706>XP_005261182 Length = 3346 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LE++ ASLE Sbjct: 2697 LEELRASLE 2705>XP_005261181 Length = 3347 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LE++ ASLE Sbjct: 2698 LEELRASLE 2706>NP_057427 Length = 3114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEDINASL 8 L++INASL Sbjct: 979 LKEINASL 986>NP_078997 Length = 3616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 LED++ SLE Sbjct: 3585 LEDLDNSLE 3593>NP_055464 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EDINASLE 9 ED+ ASLE Sbjct: 114 EDMEASLE 121>NP_002214 Length = 2701 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 L+D+ ASLE Sbjct: 1606 LQDVVASLE 1614>NP_079113 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEDINASLE 9 LED NA+ E Sbjct: 615 LEDANAATE 623>XP_006720758 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEDINASLE 9 LED NA+ E Sbjct: 652 LEDANAATE 660>XP_006720757 Length = 1008 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEDINASLE 9 LED NA+ E Sbjct: 431 LEDANAATE 439>XP_006720756 Length = 1229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEDINASLE 9 LED NA+ E Sbjct: 652 LEDANAATE 660>XP_006719127 Length = 1865 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 L+D+ ASLE Sbjct: 1606 LQDVVASLE 1614>NP_005742 Length = 3907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEDINASLE 9 LED+ SLE Sbjct: 3242 LEDLKFSLE 3250>NP_671714 Length = 3899 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEDINASLE 9 LED+ SLE Sbjct: 3234 LEDLKFSLE 3242>NP_689637 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EDINASLE 9 ED+ ASLE Sbjct: 832 EDLAASLE 839>NP_002461 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 +ED+ +SLE Sbjct: 1032 VEDLESSLE 1040>NP_001243888 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDINASLE 9 ED+N+S++ Sbjct: 397 EDVNSSIK 404>NP_001277 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EDINASLE 9 ED+N+S++ Sbjct: 419 EDVNSSIK 426>NP_113602 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 L+D++ SLE Sbjct: 471 LQDLSVSLE 479>NP_001247434 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 L+D++ SLE Sbjct: 471 LQDLSVSLE 479>NP_006187 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EDINASL 8 EDIN+S+ Sbjct: 81 EDINSSM 87>NP_116562 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 L+D++ SLE Sbjct: 448 LQDLSVSLE 456>NP_001247433 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 L+D++ SLE Sbjct: 448 LQDLSVSLE 456>NP_056254 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LEDINASLE 9 LE++N+S++ Sbjct: 250 LEELNSSIQ 258>NP_219479 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LEDINA 6 LED+NA Sbjct: 31 LEDVNA 36>NP_061938 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EDINASLE 9 ED+ ASLE Sbjct: 131 EDVLASLE 138>XP_006726617 Length = 1688 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LEDINASLE 9 ++DINA+++ Sbjct: 1503 MQDINAAMK 1511>XP_005262298 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EDINASLE 9 ED+ ASLE Sbjct: 555 EDLAASLE 562>XP_006721591 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 +ED+ +SLE Sbjct: 1032 VEDLESSLE 1040>XP_006721263 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EDINASLE 9 ED+ ASLE Sbjct: 5 EDVLASLE 12>XP_006720409 Length = 1688 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LEDINASLE 9 ++DINA+++ Sbjct: 1503 MQDINAAMK 1511>XP_006715890 Length = 3860 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEDINASLE 9 LED+ SLE Sbjct: 3195 LEDLKFSLE 3203>XP_005250160 Length = 3939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEDINASLE 9 LED+ SLE Sbjct: 3274 LEDLKFSLE 3282>XP_005250159 Length = 3952 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEDINASLE 9 LED+ SLE Sbjct: 3287 LEDLKFSLE 3295>XP_006715821 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 L+D++ SLE Sbjct: 293 LQDLSVSLE 301>XP_005249868 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LEDINASLE 9 L+D++ SLE Sbjct: 471 LQDLSVSLE 479>XP_006710039 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LEDINASLE 9 ++DINA+++ Sbjct: 1399 MQDINAAMK 1407Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.126 0.295 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,180 Number of extensions: 797 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |