Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 18 1482 NP_001087241 18 1482 XP_005265799 18 1482 XP_005265798 18 1482 XP_005265797 18 1482 NP_005202 17 4312 NP_002011 17 4312 NP_891555 17 4312 NP_000634 17 4312 NP_000635 17 4312 NP_000636 17 4312 NP_000019 17 4312 NP_000637 17 4312 NP_000633 17 4312 NP_001275634 17 4312 NP_002244 17 4312 NP_002010 17 4312 NP_068379 17 4312 NP_060392 17 4312 XP_005270614 17 4312 NP_000344 16 5631 NP_006197 16 7355 NP_001070 16 7355 NP_997402 16 7355 NP_001167639 16 7355 NP_001167638 16 7355 NP_001128524 16 7355 NP_003168 16 7355 NP_001973 16 7355 NP_001316 16 7355 NP_003322 16 7355 NP_115604 16 7355 XP_005252204 16 7355 XP_005265800 16 7355 XP_006714103 16 7355 XP_006714102 16 7355 XP_006712792 16 7355 XP_006712791 16 7355 XP_005264072 16 7355 NP_065142 16 7355 NP_073591 16 7355 NP_056050 16 7355 NP_004295 15 9605 NP_002684 15 9605 NP_001119603 15 9605 NP_004751 15 9605>NP_000213 Length = 976 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L ARNILLT Sbjct: 793 LAARNILLT 801>NP_001087241 Length = 972 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L ARNILLT Sbjct: 789 LAARNILLT 797>XP_005265799 Length = 973 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L ARNILLT Sbjct: 790 LAARNILLT 798>XP_005265798 Length = 976 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L ARNILLT Sbjct: 793 LAARNILLT 801>XP_005265797 Length = 977 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L ARNILLT Sbjct: 794 LAARNILLT 802>NP_005202 Length = 972 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARNILLT 9 ARN+LLT Sbjct: 781 ARNVLLT 787>NP_002011 Length = 1298 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L ARNILL+ Sbjct: 1038 LAARNILLS 1046>NP_891555 Length = 1363 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L ARNILL+ Sbjct: 1038 LAARNILLS 1046>NP_000634 Length = 1532 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEARNILL 8 +EARNI+L Sbjct: 1118 VEARNIIL 1125>NP_000635 Length = 1532 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEARNILL 8 +EARNI+L Sbjct: 1118 VEARNIIL 1125>NP_000636 Length = 1515 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEARNILL 8 +EARNI+L Sbjct: 1101 VEARNIIL 1108>NP_000019 Length = 1532 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEARNILL 8 +EARNI+L Sbjct: 1118 VEARNIIL 1125>NP_000637 Length = 1516 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEARNILL 8 +EARNI+L Sbjct: 1102 VEARNIIL 1109>NP_000633 Length = 1532 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEARNILL 8 +EARNI+L Sbjct: 1118 VEARNIIL 1125>NP_001275634 Length = 972 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARNILLT 9 ARN+LLT Sbjct: 781 ARNVLLT 787>NP_002244 Length = 1356 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L ARNILL+ Sbjct: 1029 LAARNILLS 1037>NP_002010 Length = 1338 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L ARNILL+ Sbjct: 1023 LAARNILLS 1031>NP_068379 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L A+N+LLT Sbjct: 527 LRAKNLLLT 535>NP_060392 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EARNILLT 9 EARNIL T Sbjct: 439 EARNILKT 446>XP_005270614 Length = 1532 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LEARNILL 8 +EARNI+L Sbjct: 1118 VEARNIIL 1125>NP_000344 Length = 454 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LEARNILLT 9 LEA++++LT Sbjct: 133 LEAKDVILT 141>NP_006197 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 819 LAARNVLL 826>NP_001070 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 462 LAARNVLL 469>NP_997402 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 155 LAARNVLL 162>NP_001167639 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 472 LAARNVLL 479>NP_001167638 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 495 LAARNVLL 502>NP_001128524 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 472 LAARNVLL 479>NP_003168 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 495 LAARNVLL 502>NP_001973 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 835 LAARNVLL 842>NP_001316 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EARNILL 8 EARN+LL Sbjct: 157 EARNMLL 163>NP_003322 Length = 1187 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 1024 LAARNVLL 1031>NP_115604 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EARNILLT 9 E +N+LLT Sbjct: 9 EGKNVLLT 16>XP_005252204 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 495 LAARNVLL 502>XP_005265800 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 819 LAARNVLL 826>XP_006714103 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 841 LAARNVLL 848>XP_006714102 Length = 1114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 844 LAARNVLL 851>XP_006712792 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 155 LAARNVLL 162>XP_006712791 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 462 LAARNVLL 469>XP_005264072 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 L ARN+LL Sbjct: 456 LAARNVLL 463>NP_065142 Length = 250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L+ RN+LLT Sbjct: 106 LKERNMLLT 114>NP_073591 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EARNILLT 9 + RNILLT Sbjct: 33 DPRNILLT 40>NP_056050 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EARNILL 8 EARN+LL Sbjct: 157 EARNMLL 163>NP_004295 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LEARNILLT 9 + ARN LLT Sbjct: 1250 IAARNCLLT 1258>NP_002684 Length = 1239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 LEA N+LL Sbjct: 151 LEAANLLL 158>NP_001119603 Length = 1239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LEARNILL 8 LEA N+LL Sbjct: 151 LEAANLLL 158>NP_004751 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LEARNILLT 9 L+ +NILLT Sbjct: 187 LKPQNILLT 195Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.141 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 339,733 Number of extensions: 472 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |