Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_071934 18 1135 NP_001026884 18 1135 XP_005268062 18 1135 XP_005268061 18 1135 NP_001120929 17 2528 NP_066940 17 2528 NP_001153605 17 4312 NP_062816 17 4312 NP_001153606 17 4312 NP_001153602 17 4312 NP_001153604 17 4312 NP_006586 16 5631 NP_001136402 16 5631 NP_001136403 16 5631 NP_001230676 16 5631 NP_061836 16 5631 NP_387505 16 5631 NP_057582 16 5631 XP_006718422 16 5631 NP_001005619 16 7355 NP_001005731 16 7355 NP_000204 16 7355 NP_001127928 16 7355 NP_659474 16 7355 XP_005257369 16 7355 XP_005257368 16 7355 XP_006721933 16 7355 XP_006721932 16 7355 XP_006721931 16 7355 XP_006721930 16 7355 XP_005257366 16 7355 XP_006721929 16 7355 NP_003946 15 9605 NP_598328 15 9605 NP_002497 15 9605 NP_775786 15 9605 NP_148983 15 9605 NP_002598 15 9605 NP_008881 15 9605 NP_510880 15 9605 NP_976063 15 9605 XP_006715796 15 9605 XP_005249827 15 9605 XP_006713376 15 9605 XP_006713375 15 9605 XP_006710728 15 9605 XP_006710727 15 9605 XP_006710726 15 9605>NP_071934 Length = 1249 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 LDTSL KSF Sbjct: 1185 LDTSLDKSF 1193>NP_001026884 Length = 1240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 LDTSL KSF Sbjct: 1185 LDTSLDKSF 1193>XP_005268062 Length = 1272 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 LDTSL KSF Sbjct: 1217 LDTSLDKSF 1225>XP_005268061 Length = 1281 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 LDTSL KSF Sbjct: 1217 LDTSLDKSF 1225>NP_001120929 Length = 532 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LDTSLRK 7 LDTSLRK Sbjct: 20 LDTSLRK 26>NP_066940 Length = 614 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LDTSLRK 7 LDTSLRK Sbjct: 102 LDTSLRK 108>NP_001153605 Length = 951 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTSLRKSF 9 D S+RKSF Sbjct: 820 DRSMRKSF 827>NP_062816 Length = 932 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTSLRKSF 9 D S+RKSF Sbjct: 801 DRSMRKSF 808>NP_001153606 Length = 822 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTSLRKSF 9 D S+RKSF Sbjct: 691 DRSMRKSF 698>NP_001153602 Length = 923 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTSLRKSF 9 D S+RKSF Sbjct: 792 DRSMRKSF 799>NP_001153604 Length = 942 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTSLRKSF 9 D S+RKSF Sbjct: 811 DRSMRKSF 818>NP_006586 Length = 504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 L+T+LRK F Sbjct: 303 LETNLRKLF 311>NP_001136402 Length = 524 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 L+T+LRK F Sbjct: 303 LETNLRKLF 311>NP_001136403 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 L+T+LRK F Sbjct: 249 LETNLRKLF 257>NP_001230676 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 L+T+LRK F Sbjct: 130 LETNLRKLF 138>NP_061836 Length = 2320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DTSLRKS 8 DT+LRKS Sbjct: 949 DTTLRKS 955>NP_387505 Length = 2269 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DTSLRKS 8 DT+LRKS Sbjct: 949 DTTLRKS 955>NP_057582 Length = 166 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 LD+SLRK + Sbjct: 149 LDSSLRKLY 157>XP_006718422 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDTSLRKSF 9 L+T+LRK F Sbjct: 303 LETNLRKLF 311>NP_001005619 Length = 1805 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 92 IDTTLRRS 99>NP_001005731 Length = 1752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 92 IDTTLRRS 99>NP_000204 Length = 1822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 92 IDTTLRRS 99>NP_001127928 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDTSLRKSF 9 LDT LR+ F Sbjct: 505 LDTILRRMF 513>NP_659474 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDTSLRKSF 9 LDT LR+ F Sbjct: 505 LDTILRRMF 513>XP_005257369 Length = 1752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 92 IDTTLRRS 99>XP_005257368 Length = 1875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 92 IDTTLRRS 99>XP_006721933 Length = 1787 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 127 IDTTLRRS 134>XP_006721932 Length = 1821 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 38 IDTTLRRS 45>XP_006721931 Length = 1840 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 127 IDTTLRRS 134>XP_006721930 Length = 1857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 127 IDTTLRRS 134>XP_005257366 Length = 1875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 92 IDTTLRRS 99>XP_006721929 Length = 1910 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 +DT+LR+S Sbjct: 127 IDTTLRRS 134>NP_003946 Length = 225 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDTSLR 6 LDTSLR Sbjct: 16 LDTSLR 21>NP_598328 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SLRKSF 9 SLRKSF Sbjct: 571 SLRKSF 576>NP_002497 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 LDT+LR++ Sbjct: 44 LDTALRRA 51>NP_775786 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LDTSLRK 7 +DTSL+K Sbjct: 330 MDTSLKK 336>NP_148983 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDTSLR 6 LDTSLR Sbjct: 59 LDTSLR 64>NP_002598 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDTSLR 6 LDTSLR Sbjct: 59 LDTSLR 64>NP_008881 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SLRKSF 9 SLRKSF Sbjct: 694 SLRKSF 699>NP_510880 Length = 2054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TSLRKSF 9 TS+RK+F Sbjct: 1003 TSMRKTF 1009>NP_976063 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TSLRKSF 9 TS+RK+F Sbjct: 1003 TSMRKTF 1009>XP_006715796 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDTSLR 6 LDTSLR Sbjct: 59 LDTSLR 64>XP_005249827 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDTSLR 6 LDTSLR Sbjct: 73 LDTSLR 78>XP_006713376 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SLRKSF 9 SLRKSF Sbjct: 314 SLRKSF 319>XP_006713375 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SLRKSF 9 SLRKSF Sbjct: 410 SLRKSF 415>XP_006710728 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 LDT+LR++ Sbjct: 44 LDTALRRA 51>XP_006710727 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 LDT+LR++ Sbjct: 44 LDTALRRA 51>XP_006710726 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDTSLRKS 8 LDT+LR++ Sbjct: 44 LDTALRRA 51Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.132 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 467,188 Number of extensions: 866 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |