Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721991 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_001005493 17 3301 NP_705618 17 3301 NP_004289 17 3301 NP_001265241 17 3301 NP_078934 17 4312 NP_065802 17 4312 NP_001138551 17 4312 NP_036257 16 5631 NP_001005490 16 5631 NP_001070254 16 5631 NP_006020 16 5631 XP_005254198 16 5631 XP_006718388 16 5631 XP_006718387 16 5631 XP_006718386 16 5631 NP_004963 16 7355 XP_005251512 16 7355 NP_001230925 15 9605 NP_005329 15 9605 NP_001230127 15 9605 NP_001027 15 9605 NP_056509 15 9605 XP_005250362 15 9605 XP_005250361 15 9605 XP_005250038 15 9605 XP_005250037 15 9605 NP_653203 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1301 LDPLLRIVI 1309>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1301 LDPLLRIVI 1309>XP_006721991 Length = 1632 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1311 LDPLLRIVI 1319>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1311 LDPLLRIVI 1319>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1311 LDPLLRIVI 1319>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1301 LDPLLRIVI 1309>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1311 LDPLLRIVI 1319>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1311 LDPLLRIVI 1319>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1298 LDPLLRIVI 1306>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1301 LDPLLRIVI 1309>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDPLLQIVI 9 LDPLL+IVI Sbjct: 1311 LDPLLRIVI 1319>NP_001005493 Length = 314 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DPLLQIVI 9 DP LQIVI Sbjct: 18 DPQLQIVI 25>NP_705618 Length = 1391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DPLLQIVI 9 DP+LQI I Sbjct: 277 DPILQIAI 284>NP_004289 Length = 1332 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DPLLQIVI 9 DP+LQI I Sbjct: 218 DPILQIAI 225>NP_001265241 Length = 1327 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DPLLQIVI 9 DP+LQI I Sbjct: 277 DPILQIAI 284>NP_078934 Length = 1081 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LDPLLQIV 8 L PLLQIV Sbjct: 392 LPPLLQIV 399>NP_065802 Length = 657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDPLLQI 7 LDPLLQ+ Sbjct: 478 LDPLLQM 484>NP_001138551 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDPLLQI 7 LDPLLQ+ Sbjct: 478 LDPLLQM 484>NP_036257 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DPLLQIV 8 DP+LQ+V Sbjct: 318 DPVLQVV 324>NP_001005490 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DPLLQIVI 9 DP LQ++I Sbjct: 18 DPQLQVII 25>NP_001070254 Length = 1735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DPLLQI 7 DPLLQI Sbjct: 97 DPLLQI 102>NP_006020 Length = 353 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDPLLQIVI 9 L+PLLQ V+ Sbjct: 268 LEPLLQKVV 276>XP_005254198 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DPLLQIV 8 DP+LQ+V Sbjct: 318 DPVLQVV 324>XP_006718388 Length = 1331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DPLLQI 7 DPLLQI Sbjct: 160 DPLLQI 165>XP_006718387 Length = 1798 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DPLLQI 7 DPLLQI Sbjct: 160 DPLLQI 165>XP_006718386 Length = 1822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DPLLQI 7 DPLLQI Sbjct: 160 DPLLQI 165>NP_004963 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDPLLQIVI 9 +DP+LQ+ + Sbjct: 35 IDPVLQVYL 43>XP_005251512 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDPLLQIVI 9 +DP+LQ+ + Sbjct: 35 IDPVLQVYL 43>NP_001230925 Length = 4865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DPLLQIVI 9 DPL QI++ Sbjct: 3546 DPLHQIIL 3553>NP_005329 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDPLLQIVI 9 L PL+Q+++ Sbjct: 222 LAPLIQVIL 230>NP_001230127 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDPLLQIVI 9 L PL+Q+++ Sbjct: 222 LAPLIQVIL 230>NP_001027 Length = 4870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DPLLQIVI 9 DPL QI++ Sbjct: 3551 DPLHQIIL 3558>NP_056509 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDPLLQ 6 +DPLLQ Sbjct: 151 MDPLLQ 156>XP_005250362 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDPLLQIVI 9 L PL+Q+++ Sbjct: 188 LAPLIQVIL 196>XP_005250361 Length = 1008 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDPLLQIVI 9 L PL+Q+++ Sbjct: 193 LAPLIQVIL 201>XP_005250038 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDPLLQ 6 +DPLLQ Sbjct: 151 MDPLLQ 156>XP_005250037 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDPLLQ 6 +DPLLQ Sbjct: 195 MDPLLQ 200>NP_653203 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDPLLQ 6 LDP+LQ Sbjct: 157 LDPMLQ 162Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.164 0.451 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 601,105 Number of extensions: 739 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |