Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185763 21 229 NP_055459 21 229 XP_006711718 21 229 XP_006711716 21 229 XP_006711715 21 229 XP_006711714 21 229 XP_006711713 21 229 XP_006711712 21 229 XP_006711710 21 229 XP_006711709 21 229 XP_005277503 21 229 XP_005273038 21 229 XP_006711708 21 229 XP_005277500 21 229 XP_006711707 21 229 XP_005277499 21 229 XP_006711706 21 229 XP_006711705 21 229 XP_006710142 21 229 XP_006710141 21 229 NP_003493 18 1935 NP_851393 18 1935 XP_005255667 18 1935 XP_005255666 18 1935 XP_005255665 18 1935 XP_005255664 18 1935 NP_001128625 17 3301 XP_005273523 17 3301 XP_006716387 17 3301 XP_005273522 17 3301 XP_005273521 17 3301 XP_005273520 17 3301 XP_006716386 17 3301 NP_001121903 17 3301 NP_001128626 17 3301 NP_056174 17 3301 NP_001185471 16 5631 NP_001185472 16 5631 NP_060028 16 5631 NP_000558 16 5631 NP_001257903 16 5631 NP_060710 16 5631 NP_001188336 16 5631 NP_872337 16 5631 NP_001273278 16 5631 NP_001026881 16 5631 NP_001122089 16 5631 NP_114128 16 5631 NP_001273540 16 5631 NP_036307 16 5631 NP_208385 16 5631 XP_006721269 16 5631 XP_006721228 16 5631 XP_005256347 16 5631 XP_005256346 16 5631 XP_005256345 16 5631 XP_005252908 16 5631 XP_005267236 16 5631 XP_005267235 16 5631 XP_006715650 16 5631 XP_005267234 16 5631 XP_006714955 16 5631 XP_006711493 16 5631 XP_005245363 16 5631 XP_005245362 16 5631 NP_114432 16 7355 NP_149419 16 7355 NP_057533 15 9605 XP_006726899 15 9605 XP_006724472 15 9605 XP_005261681 15 9605 XP_006724322 15 9605 XP_006710183 15 9605>NP_001185763 Length = 2362 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1179 LDLGATFTV 1187>NP_055459 Length = 2346 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1179 LDLGATFTV 1187>XP_006711718 Length = 1436 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 186 LDLGATFTV 194>XP_006711716 Length = 2411 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1245 LDLGATFTV 1253>XP_006711715 Length = 2428 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1179 LDLGATFTV 1187>XP_006711714 Length = 2429 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1179 LDLGATFTV 1187>XP_006711713 Length = 2432 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1182 LDLGATFTV 1190>XP_006711712 Length = 2473 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1342 LDLGATFTV 1350>XP_006711710 Length = 2494 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1245 LDLGATFTV 1253>XP_006711709 Length = 2495 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1245 LDLGATFTV 1253>XP_005277503 Length = 2498 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1342 LDLGATFTV 1350>XP_005273038 Length = 2509 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1342 LDLGATFTV 1350>XP_006711708 Length = 2512 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1342 LDLGATFTV 1350>XP_005277500 Length = 2525 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1342 LDLGATFTV 1350>XP_006711707 Length = 2553 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1342 LDLGATFTV 1350>XP_005277499 Length = 2561 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1342 LDLGATFTV 1350>XP_006711706 Length = 2591 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1342 LDLGATFTV 1350>XP_006711705 Length = 2592 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 1342 LDLGATFTV 1350>XP_006710142 Length = 671 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 131 LDLGATFTV 139>XP_006710141 Length = 672 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDIGATFTV 9 LD+GATFTV Sbjct: 131 LDLGATFTV 139>NP_003493 Length = 862 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LDIGATFT 8 LD+GA+FT Sbjct: 10 LDLGASFT 17>NP_851393 Length = 826 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LDIGATFT 8 LD+GA+FT Sbjct: 10 LDLGASFT 17>XP_005255667 Length = 473 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LDIGATFT 8 LD+GA+FT Sbjct: 59 LDLGASFT 66>XP_005255666 Length = 862 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LDIGATFT 8 LD+GA+FT Sbjct: 10 LDLGASFT 17>XP_005255665 Length = 875 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LDIGATFT 8 LD+GA+FT Sbjct: 59 LDLGASFT 66>XP_005255664 Length = 911 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LDIGATFT 8 LD+GA+FT Sbjct: 59 LDLGASFT 66>NP_001128625 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 353 LAIGASFTV 361>XP_005273523 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 353 LAIGASFTV 361>XP_006716387 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 353 LAIGASFTV 361>XP_005273522 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 353 LAIGASFTV 361>XP_005273521 Length = 502 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 363 LAIGASFTV 371>XP_005273520 Length = 502 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 363 LAIGASFTV 371>XP_006716386 Length = 502 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 363 LAIGASFTV 371>NP_001121903 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 353 LAIGASFTV 361>NP_001128626 Length = 481 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 353 LAIGASFTV 361>NP_056174 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDIGATFTV 9 L IGA+FTV Sbjct: 353 LAIGASFTV 361>NP_001185471 Length = 950 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 495 LDIGKVFT 502>NP_001185472 Length = 940 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 485 LDIGKVFT 492>NP_060028 Length = 1017 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 468 LDIGKVFT 475>NP_000558 Length = 224 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DIGATFTV 9 DIG +FTV Sbjct: 88 DIGYSFTV 95>NP_001257903 Length = 5121 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 468 LDIGKVFT 475>NP_060710 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 192 LDIGRVFT 199>NP_001188336 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DIGATFTV 9 D G TFTV Sbjct: 593 DCGKTFTV 600>NP_872337 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DIGATFTV 9 D G TFTV Sbjct: 565 DCGKTFTV 572>NP_001273278 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 92 LDIGRVFT 99>NP_001026881 Length = 290 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IGATFTV 9 IG TFTV Sbjct: 260 IGGTFTV 266>NP_001122089 Length = 769 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDIGATFTV 9 LD+ TFTV Sbjct: 536 LDMNRTFTV 544>NP_114128 Length = 795 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDIGATFTV 9 LD+ TFTV Sbjct: 562 LDMNRTFTV 570>NP_001273540 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDIGATFTV 9 LD+ TFTV Sbjct: 563 LDMNRTFTV 571>NP_036307 Length = 471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IGATFT 8 IGATFT Sbjct: 241 IGATFT 246>NP_208385 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IGATFT 8 IGATFT Sbjct: 241 IGATFT 246>XP_006721269 Length = 5138 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 485 LDIGKVFT 492>XP_006721228 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DIGATFTV 9 D G TFTV Sbjct: 425 DCGKTFTV 432>XP_005256347 Length = 701 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DIGATFTV 9 D G TFTV Sbjct: 537 DCGKTFTV 544>XP_005256346 Length = 701 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DIGATFTV 9 D G TFTV Sbjct: 537 DCGKTFTV 544>XP_005256345 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DIGATFTV 9 D G TFTV Sbjct: 593 DCGKTFTV 600>XP_005252908 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IGATFT 8 IGATFT Sbjct: 236 IGATFT 241>XP_005267236 Length = 768 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDIGATFTV 9 LD+ TFTV Sbjct: 535 LDMNRTFTV 543>XP_005267235 Length = 773 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDIGATFTV 9 LD+ TFTV Sbjct: 563 LDMNRTFTV 571>XP_006715650 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDIGATFTV 9 LD+ TFTV Sbjct: 542 LDMNRTFTV 550>XP_005267234 Length = 795 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LDIGATFTV 9 LD+ TFTV Sbjct: 562 LDMNRTFTV 570>XP_006714955 Length = 198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IGATFTV 9 IG TFTV Sbjct: 168 IGGTFTV 174>XP_006711493 Length = 673 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 92 LDIGRVFT 99>XP_005245363 Length = 723 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 142 LDIGRVFT 149>XP_005245362 Length = 773 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LDIGATFT 8 LDIG FT Sbjct: 192 LDIGRVFT 199>NP_114432 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DIGATFTV 9 ++G TFT+ Sbjct: 626 ELGVTFTI 633>NP_149419 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DIGATFT 8 D+G TFT Sbjct: 68 DLGMTFT 74>NP_057533 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDIGAT 6 LD+GAT Sbjct: 49 LDVGAT 54>XP_006726899 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDIGAT 6 LD+GAT Sbjct: 95 LDVGAT 100>XP_006724472 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDIGAT 6 LD+GAT Sbjct: 98 LDVGAT 103>XP_005261681 Length = 145 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDIGAT 6 LD+GAT Sbjct: 49 LDVGAT 54>XP_006724322 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDIGAT 6 LD+GAT Sbjct: 49 LDVGAT 54>XP_006710183 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDIGAT 6 LD+GAT Sbjct: 98 LDVGAT 103Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.146 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,711 Number of extensions: 994 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |