Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 20 390 NP_005087 17 2528 NP_001164634 17 2528 NP_001164633 17 2528 NP_963893 17 2528 NP_060105 17 2528 XP_005262367 17 2528 XP_006724778 17 2528 XP_005262366 17 2528 XP_005274094 17 2528 XP_006718644 17 2528 XP_005274093 17 2528 XP_005274092 17 2528 NP_001123230 17 4312 NP_001074293 17 4312 NP_001263982 17 4312 XP_005264188 17 4312 XP_005264187 17 4312 XP_005264186 17 4312 NP_071752 17 4312 NP_004841 16 5631 NP_001185863 16 5631 NP_258261 16 5631 XP_006715303 16 5631 XP_005246247 16 5631 NP_005643 16 7355 NP_001010938 16 7355 NP_005772 16 7355 NP_060379 16 7355 XP_005256181 16 7355 XP_005256180 16 7355 XP_005256179 16 7355 XP_005256178 16 7355 XP_006713531 16 7355 XP_005269332 16 7355 XP_005269331 16 7355 XP_005269330 16 7355 XP_005269329 16 7355 XP_005269328 16 7355 XP_005269327 16 7355 XP_006713530 16 7355 XP_006713529 16 7355 XP_005269326 16 7355 XP_006713528 16 7355 XP_006713527 16 7355 XP_005269325 16 7355 XP_006713526 16 7355 XP_006713525 16 7355 XP_006713524 16 7355 XP_006713523 16 7355 NP_001171989 15 9605 NP_001171991 15 9605 NP_001171990 15 9605 NP_932766 15 9605 NP_004280 15 9605 NP_001159506 15 9605 NP_940940 15 9605 NP_001159507 15 9605 NP_003449 15 9605 NP_004696 15 9605 XP_006713443 15 9605 NP_940877 15 9605>NP_003290 Length = 803 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDGLNSSQI 9 LDGLN+SQI Sbjct: 58 LDGLNASQI 66>NP_005087 Length = 1370 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 DG+NSSQ Sbjct: 201 DGINSSQ 207>NP_001164634 Length = 495 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 DG+NSSQ Sbjct: 201 DGINSSQ 207>NP_001164633 Length = 1358 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 DG+NSSQ Sbjct: 201 DGINSSQ 207>NP_963893 Length = 1370 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 DG+NSSQ Sbjct: 201 DGINSSQ 207>NP_060105 Length = 885 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DGLNSSQI 9 DG+NSS+I Sbjct: 736 DGMNSSKI 743>XP_005262367 Length = 1358 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 DG+NSSQ Sbjct: 201 DGINSSQ 207>XP_006724778 Length = 1370 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 DG+NSSQ Sbjct: 201 DGINSSQ 207>XP_005262366 Length = 1370 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 DG+NSSQ Sbjct: 201 DGINSSQ 207>XP_005274094 Length = 713 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DGLNSSQI 9 DG+NSS+I Sbjct: 564 DGMNSSKI 571>XP_006718644 Length = 862 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DGLNSSQI 9 DG+NSS+I Sbjct: 713 DGMNSSKI 720>XP_005274093 Length = 862 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DGLNSSQI 9 DG+NSS+I Sbjct: 713 DGMNSSKI 720>XP_005274092 Length = 885 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DGLNSSQI 9 DG+NSS+I Sbjct: 736 DGMNSSKI 743>NP_001123230 Length = 512 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 +GLNSSQ Sbjct: 206 EGLNSSQ 212>NP_001074293 Length = 456 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDGLNSSQI 9 L+GLN SQ+ Sbjct: 216 LNGLNFSQV 224>NP_001263982 Length = 505 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDGLNSSQI 9 L+GLN SQ+ Sbjct: 216 LNGLNFSQV 224>XP_005264188 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDGLNSSQI 9 L+GLN SQ+ Sbjct: 216 LNGLNFSQV 224>XP_005264187 Length = 402 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDGLNSSQI 9 L+GLN SQ+ Sbjct: 113 LNGLNFSQV 121>XP_005264186 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDGLNSSQI 9 L+GLN SQ+ Sbjct: 216 LNGLNFSQV 224>NP_071752 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 +GLNSSQ Sbjct: 206 EGLNSSQ 212>NP_004841 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDGLNS 6 LDGLNS Sbjct: 47 LDGLNS 52>NP_001185863 Length = 1492 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LDGLNSSQI 9 LDG+++SQ+ Sbjct: 1306 LDGVDTSQL 1314>NP_258261 Length = 1464 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LDGLNSSQI 9 LDG+++SQ+ Sbjct: 1278 LDGVDTSQL 1286>XP_006715303 Length = 1463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LDGLNSSQI 9 LDG+++SQ+ Sbjct: 1334 LDGVDTSQL 1342>XP_005246247 Length = 1417 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDGLNS 6 LDGLNS Sbjct: 47 LDGLNS 52>NP_005643 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GLNSSQ 8 GLNSSQ Sbjct: 418 GLNSSQ 423>NP_001010938 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 396 GLNGSQI 402>NP_005772 Length = 1038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 333 GLNGSQI 339>NP_060379 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 61 GLNKSQI 67>XP_005256181 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GLNSSQ 8 GLNSSQ Sbjct: 340 GLNSSQ 345>XP_005256180 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GLNSSQ 8 GLNSSQ Sbjct: 418 GLNSSQ 423>XP_005256179 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GLNSSQ 8 GLNSSQ Sbjct: 421 GLNSSQ 426>XP_005256178 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GLNSSQ 8 GLNSSQ Sbjct: 421 GLNSSQ 426>XP_006713531 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 411 GLNGSQI 417>XP_005269332 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 19 GLNGSQI 25>XP_005269331 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 94 GLNGSQI 100>XP_005269330 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 257 GLNGSQI 263>XP_005269329 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 365 GLNGSQI 371>XP_005269328 Length = 1055 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 333 GLNGSQI 339>XP_005269327 Length = 1055 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 333 GLNGSQI 339>XP_006713530 Length = 1063 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 341 GLNGSQI 347>XP_006713529 Length = 1085 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 411 GLNGSQI 417>XP_005269326 Length = 1087 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 365 GLNGSQI 371>XP_006713528 Length = 1101 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 411 GLNGSQI 417>XP_006713527 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 411 GLNGSQI 417>XP_005269325 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 396 GLNGSQI 402>XP_006713526 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 411 GLNGSQI 417>XP_006713525 Length = 1119 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 397 GLNGSQI 403>XP_006713524 Length = 1131 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 411 GLNGSQI 417>XP_006713523 Length = 1133 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GLNSSQI 9 GLN SQI Sbjct: 411 GLNGSQI 417>NP_001171989 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGLNSSQ 8 DG+NS Q Sbjct: 48 DGVNSGQ 54>NP_001171991 Length = 154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGLNSSQ 8 DG+NS Q Sbjct: 16 DGVNSGQ 22>NP_001171990 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGLNSSQ 8 DG+NS Q Sbjct: 80 DGVNSGQ 86>NP_932766 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGLNSSQ 8 DG+NS Q Sbjct: 131 DGVNSGQ 137>NP_004280 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DGLNSS 7 DG+NSS Sbjct: 293 DGMNSS 298>NP_001159506 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDGLNS 6 LDG+NS Sbjct: 51 LDGINS 56>NP_940940 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDGLNS 6 LDG+NS Sbjct: 51 LDGINS 56>NP_001159507 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDGLNS 6 LDG+NS Sbjct: 51 LDGINS 56>NP_003449 Length = 3926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 DG++SSQ Sbjct: 688 DGISSSQ 694>NP_004696 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDGLNS 6 LDG+NS Sbjct: 448 LDGINS 453>XP_006713443 Length = 3970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DGLNSSQ 8 DG++SSQ Sbjct: 732 DGISSSQ 738>NP_940877 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDGLNSSQI 9 LDG ++SQ+ Sbjct: 658 LDGRSNSQV 666Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.130 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 430,960 Number of extensions: 647 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |