Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_005270208 18 1935 XP_005270207 18 1935 XP_005270206 18 1935 NP_077302 18 1935 NP_000042 17 2528 XP_006718908 17 2528 XP_005271621 17 2528 XP_006718907 17 2528 XP_006718906 17 2528 XP_005271619 17 2528 XP_005271618 17 2528 NP_060045 16 5631 XP_005256627 16 5631 XP_006721558 16 5631 XP_006721557 16 5631 XP_006721556 16 5631 XP_005256626 16 5631 NP_001273542 16 7355 NP_073602 16 7355 NP_001159709 16 7355 NP_001152763 16 7355 XP_006710433 16 7355 XP_006710432 16 7355 XP_006710431 16 7355 XP_006710430 16 7355 XP_006710429 16 7355 NP_079012 16 7355 NP_000022 15 9605 NP_001013860 15 9605 XP_006721205 15 9605 XP_005255864 15 9605 XP_006721204 15 9605 XP_006721203 15 9605 XP_006721202 15 9605 XP_006721201 15 9605 XP_005251856 15 9605 XP_006714554 15 9605 XP_005248410 15 9605 XP_006714553 15 9605 XP_005248407 15 9605 XP_005248404 15 9605 XP_005248403 15 9605 XP_006714552 15 9605 XP_005248402 15 9605>XP_005270208 Length = 300 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 +DGLALR L Sbjct: 153 VDGLALRGL 161>XP_005270207 Length = 300 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 +DGLALR L Sbjct: 153 VDGLALRGL 161>XP_005270206 Length = 387 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 +DGLALR L Sbjct: 240 VDGLALRGL 248>NP_077302 Length = 300 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 +DGLALR L Sbjct: 153 VDGLALRGL 161>NP_000042 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 LD LALRAL Sbjct: 2447 LDELALRAL 2455>XP_006718908 Length = 1708 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 LD LALRAL Sbjct: 1099 LDELALRAL 1107>XP_005271621 Length = 2708 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 LD LALRAL Sbjct: 2099 LDELALRAL 2107>XP_006718907 Length = 3050 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 LD LALRAL Sbjct: 2441 LDELALRAL 2449>XP_006718906 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 LD LALRAL Sbjct: 2447 LDELALRAL 2455>XP_005271619 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 LD LALRAL Sbjct: 2447 LDELALRAL 2455>XP_005271618 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDGLALRAL 9 LD LALRAL Sbjct: 2447 LDELALRAL 2455>NP_060045 Length = 1419 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDGLALRA 8 +DGLA+R+ Sbjct: 704 MDGLAIRS 711>XP_005256627 Length = 899 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDGLALRA 8 +DGLA+R+ Sbjct: 704 MDGLAIRS 711>XP_006721558 Length = 909 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDGLALRA 8 +DGLA+R+ Sbjct: 704 MDGLAIRS 711>XP_006721557 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDGLALRA 8 +DGLA+R+ Sbjct: 704 MDGLAIRS 711>XP_006721556 Length = 1357 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDGLALRA 8 +DGLA+R+ Sbjct: 704 MDGLAIRS 711>XP_005256626 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDGLALRA 8 +DGLA+R+ Sbjct: 673 MDGLAIRS 680>NP_001273542 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DGLALRAL 9 DGLAL AL Sbjct: 558 DGLALCAL 565>NP_073602 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DGLALRAL 9 DGLAL AL Sbjct: 539 DGLALCAL 546>NP_001159709 Length = 484 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DGLALRAL 9 D LALRAL Sbjct: 322 DQLALRAL 329>NP_001152763 Length = 981 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DGLALRAL 9 DGLAL AL Sbjct: 453 DGLALCAL 460>XP_006710433 Length = 1169 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DGLALRA 8 DGL LRA Sbjct: 107 DGLGLRA 113>XP_006710432 Length = 1202 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DGLALRA 8 DGL LRA Sbjct: 107 DGLGLRA 113>XP_006710431 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DGLALRA 8 DGL LRA Sbjct: 107 DGLGLRA 113>XP_006710430 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DGLALRA 8 DGL LRA Sbjct: 107 DGLGLRA 113>XP_006710429 Length = 1238 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DGLALRA 8 DGL LRA Sbjct: 107 DGLGLRA 113>NP_079012 Length = 484 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 DGLALRAL 9 D LALRAL Sbjct: 322 DQLALRAL 329>NP_000022 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GLALRAL 9 GLALRA+ Sbjct: 232 GLALRAV 238>NP_001013860 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDGLAL 6 LDGLAL Sbjct: 483 LDGLAL 488>XP_006721205 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDGLAL 6 LDGLAL Sbjct: 483 LDGLAL 488>XP_005255864 Length = 1372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDGLAL 6 LDGLAL Sbjct: 447 LDGLAL 452>XP_006721204 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDGLAL 6 LDGLAL Sbjct: 447 LDGLAL 452>XP_006721203 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDGLAL 6 LDGLAL Sbjct: 483 LDGLAL 488>XP_006721202 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDGLAL 6 LDGLAL Sbjct: 483 LDGLAL 488>XP_006721201 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDGLAL 6 LDGLAL Sbjct: 483 LDGLAL 488>XP_005251856 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GLALRAL 9 GLALRA+ Sbjct: 261 GLALRAV 267>XP_006714554 Length = 1442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDGLALRA 8 LDG +LRA Sbjct: 868 LDGKSLRA 875>XP_005248410 Length = 2132 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDGLALRA 8 LDG +LRA Sbjct: 1558 LDGKSLRA 1565>XP_006714553 Length = 2792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDGLALRA 8 LDG +LRA Sbjct: 2677 LDGKSLRA 2684>XP_005248407 Length = 3208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDGLALRA 8 LDG +LRA Sbjct: 2634 LDGKSLRA 2641>XP_005248404 Length = 3250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDGLALRA 8 LDG +LRA Sbjct: 2676 LDGKSLRA 2683>XP_005248403 Length = 3250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDGLALRA 8 LDG +LRA Sbjct: 2676 LDGKSLRA 2683>XP_006714552 Length = 3251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDGLALRA 8 LDG +LRA Sbjct: 2677 LDGKSLRA 2684>XP_005248402 Length = 3251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDGLALRA 8 LDG +LRA Sbjct: 2677 LDGKSLRA 2684Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.152 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 359,626 Number of extensions: 348 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |