Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 20 509 NP_001276866 20 509 NP_004439 20 509 NP_001276865 20 509 NP_001005862 20 509 XP_005257197 20 509 XP_006721828 20 509 NP_789786 17 4312 XP_005276824 17 4312 XP_005276823 17 4312 XP_005276822 17 4312 XP_006726278 17 4312 XP_005276821 17 4312 XP_006726277 17 4312 XP_005276820 17 4312 XP_005276819 17 4312 XP_005276818 17 4312 XP_005248520 17 4312 XP_005248519 17 4312 XP_005248518 17 4312 XP_006714633 17 4312 XP_005248517 17 4312 XP_006714632 17 4312 XP_005248516 17 4312 XP_005248515 17 4312 XP_005248514 17 4312 NP_000373 16 7355 NP_001026976 16 7355 NP_006493 15 9605 NP_001036064 15 9605 NP_005226 15 9605 NP_001277185 15 9605 NP_056114 15 9605 NP_001277186 15 9605 NP_003175 15 9605 NP_997210 15 9605 XP_005267533 15 9605 XP_005267531 15 9605 XP_005267530 15 9605 XP_006716684 15 9605 XP_005249243 15 9605 XP_005246434 15 9605 XP_005246433 15 9605 XP_005246432 15 9605 XP_006712427 15 9605>NP_005219 Length = 1210 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LDEAYVMA 8 LDEAYVMA Sbjct: 760 LDEAYVMA 767>NP_001276866 Length = 1055 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LDEAYVMA 8 LDEAYVMA Sbjct: 768 LDEAYVMA 775>NP_004439 Length = 1255 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LDEAYVMA 8 LDEAYVMA Sbjct: 768 LDEAYVMA 775>NP_001276865 Length = 1240 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LDEAYVMA 8 LDEAYVMA Sbjct: 753 LDEAYVMA 760>NP_001005862 Length = 1225 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LDEAYVMA 8 LDEAYVMA Sbjct: 738 LDEAYVMA 745>XP_005257197 Length = 1225 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LDEAYVMA 8 LDEAYVMA Sbjct: 738 LDEAYVMA 745>XP_006721828 Length = 1336 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LDEAYVMA 8 LDEAYVMA Sbjct: 849 LDEAYVMA 856>NP_789786 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 317 EEAYVMA 323>XP_005276824 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 192 EEAYVMA 198>XP_005276823 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 192 EEAYVMA 198>XP_005276822 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 227 EEAYVMA 233>XP_006726278 Length = 434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 240 EEAYVMA 246>XP_005276821 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 244 EEAYVMA 250>XP_006726277 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 312 EEAYVMA 318>XP_005276820 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 316 EEAYVMA 322>XP_005276819 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 317 EEAYVMA 323>XP_005276818 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 317 EEAYVMA 323>XP_005248520 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 192 EEAYVMA 198>XP_005248519 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 192 EEAYVMA 198>XP_005248518 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 227 EEAYVMA 233>XP_006714633 Length = 434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 240 EEAYVMA 246>XP_005248517 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 244 EEAYVMA 250>XP_006714632 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 312 EEAYVMA 318>XP_005248516 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 316 EEAYVMA 322>XP_005248515 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 317 EEAYVMA 323>XP_005248514 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DEAYVMA 8 +EAYVMA Sbjct: 317 EEAYVMA 323>NP_000373 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDEAYV 6 LDEAY+ Sbjct: 92 LDEAYI 97>NP_001026976 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDEAYV 6 LDEAY+ Sbjct: 92 LDEAYI 97>NP_006493 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDEAYV 6 +DEAYV Sbjct: 114 IDEAYV 119>NP_001036064 Length = 1292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 +DEA +MA Sbjct: 766 MDEALIMA 773>NP_005226 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 +DEA +MA Sbjct: 766 MDEALIMA 773>NP_001277185 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 L EA+VMA Sbjct: 165 LTEAFVMA 172>NP_056114 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 L EA+VMA Sbjct: 124 LTEAFVMA 131>NP_001277186 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 L EA+VMA Sbjct: 124 LTEAFVMA 131>NP_003175 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDEAYV 6 +DEAYV Sbjct: 309 IDEAYV 314>NP_997210 Length = 123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LDEAYVM 7 L+E+YVM Sbjct: 40 LEESYVM 46>XP_005267533 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 L EA+VMA Sbjct: 209 LTEAFVMA 216>XP_005267531 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 L EA+VMA Sbjct: 124 LTEAFVMA 131>XP_005267530 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 L EA+VMA Sbjct: 209 LTEAFVMA 216>XP_006716684 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDEAYV 6 +DEAYV Sbjct: 309 IDEAYV 314>XP_005249243 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LDEAYV 6 +DEAYV Sbjct: 52 IDEAYV 57>XP_005246434 Length = 1282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 +DEA +MA Sbjct: 756 MDEALIMA 763>XP_005246433 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 +DEA +MA Sbjct: 756 MDEALIMA 763>XP_005246432 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 +DEA +MA Sbjct: 781 MDEALIMA 788>XP_006712427 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDEAYVMA 8 +DEA +MA Sbjct: 781 MDEALIMA 788Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.134 0.347 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 429,161 Number of extensions: 340 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |