Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 390 NP_000242 20 390 XP_005264389 20 390 XP_003960787 17 2528 XP_003118801 17 2528 XP_003119723 17 2528 NP_056263 17 3301 NP_055452 17 3301 NP_001139311 17 3301 XP_006717808 17 3301 XP_005251384 17 3301 XP_006716547 17 3301 NP_001139310 17 3301 NP_059107 16 7355 NP_075013 16 7355 NP_075014 16 7355 NP_000335 16 7355 NP_075015 16 7355 NP_075012 16 7355 NP_003986 16 7355 NP_079303 16 7355 XP_005248632 16 7355 XP_005276832 16 7355 XP_005259334 16 7355 XP_005259333 16 7355 XP_005251536 16 7355 XP_006716841 16 7355 XP_005251535 16 7355 XP_006714740 16 7355 NP_000543 15 9605 NP_060617 15 9605 NP_001028204 15 9605 NP_001028203 15 9605 NP_001028202 15 9605 NP_085152 15 9605 XP_006709992 15 9605 XP_005244773 15 9605 XP_005244772 15 9605 XP_006710392 15 9605 XP_006710191 15 9605 NP_001004688 15 9605 NP_001004691 15 9605 NP_001004690 15 9605>NP_001245210 Length = 868 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDAVASFAH 9 LDAV SFAH Sbjct: 536 LDAVVSFAH 544>NP_000242 Length = 934 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDAVASFAH 9 LDAV SFAH Sbjct: 602 LDAVVSFAH 610>XP_005264389 Length = 921 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LDAVASFAH 9 LDAV SFAH Sbjct: 602 LDAVVSFAH 610>XP_003960787 Length = 675 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LDAVASFA 8 LDAVA+FA Sbjct: 511 LDAVAAFA 518>XP_003118801 Length = 675 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LDAVASFA 8 LDAVA+FA Sbjct: 511 LDAVAAFA 518>XP_003119723 Length = 675 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 LDAVASFA 8 LDAVA+FA Sbjct: 511 LDAVAAFA 518>NP_056263 Length = 203 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DAVASFAH 9 DA+ SFAH Sbjct: 154 DALLSFAH 161>NP_055452 Length = 333 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DAVASFA 8 DAVASFA Sbjct: 71 DAVASFA 77>NP_001139311 Length = 348 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DAVASFA 8 DAVASFA Sbjct: 71 DAVASFA 77>XP_006717808 Length = 373 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DAVASFAH 9 DA+ SFAH Sbjct: 324 DALLSFAH 331>XP_005251384 Length = 320 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DAVASFA 8 DAVASFA Sbjct: 58 DAVASFA 64>XP_006716547 Length = 348 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DAVASFA 8 DAVASFA Sbjct: 71 DAVASFA 77>NP_001139310 Length = 300 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 DAVASFA 8 DAVASFA Sbjct: 38 DAVASFA 44>NP_059107 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AVASFAH 9 AVASF H Sbjct: 46 AVASFKH 52>NP_075013 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AVASFAH 9 AVASF H Sbjct: 46 AVASFKH 52>NP_075014 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AVASFAH 9 AVASF H Sbjct: 46 AVASFKH 52>NP_000335 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AVASFAH 9 AVASF H Sbjct: 46 AVASFKH 52>NP_075015 Length = 250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AVASFAH 9 AVASF H Sbjct: 46 AVASFKH 52>NP_075012 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AVASFAH 9 AVASF H Sbjct: 46 AVASFKH 52>NP_003986 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAVASF 7 LDAV+SF Sbjct: 938 LDAVSSF 944>NP_079303 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DAVASFAH 9 DAV SF H Sbjct: 293 DAVKSFNH 300>XP_005248632 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AVASFAH 9 AVASF H Sbjct: 46 AVASFKH 52>XP_005276832 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AVASFAH 9 AVASF H Sbjct: 46 AVASFKH 52>XP_005259334 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DAVASFAH 9 DAV SF H Sbjct: 203 DAVKSFNH 210>XP_005259333 Length = 792 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DAVASFAH 9 DAV SF H Sbjct: 293 DAVKSFNH 300>XP_005251536 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAVASF 7 LDAV+SF Sbjct: 612 LDAVSSF 618>XP_006716841 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAVASF 7 LDAV+SF Sbjct: 917 LDAVSSF 923>XP_005251535 Length = 1050 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAVASF 7 LDAV+SF Sbjct: 941 LDAVSSF 947>XP_006714740 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AVASFAH 9 AVASF H Sbjct: 46 AVASFKH 52>NP_000543 Length = 2813 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DAVASFAH 9 + +AS+AH Sbjct: 2175 EVIASYAH 2182>NP_060617 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDAVASFAH 9 +DA++ FA+ Sbjct: 67 IDAISGFAY 75>NP_001028204 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDAVASFAH 9 +DA++ FA+ Sbjct: 67 IDAISGFAY 75>NP_001028203 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDAVASFAH 9 +DA++ FA+ Sbjct: 89 IDAISGFAY 97>NP_001028202 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDAVASFAH 9 +DA++ FA+ Sbjct: 101 IDAISGFAY 109>NP_085152 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDAVASFAH 9 LD++ SF H Sbjct: 187 LDSMLSFMH 195>XP_006709992 Length = 1311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DAVASFAH 9 DAV SFA+ Sbjct: 899 DAVLSFAN 906>XP_005244773 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDAVASFAH 9 LD++ SF H Sbjct: 145 LDSMLSFMH 153>XP_005244772 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDAVASFAH 9 LD++ SF H Sbjct: 187 LDSMLSFMH 195>XP_006710392 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LDAVASFAH 9 LD++ SF H Sbjct: 187 LDSMLSFMH 195>XP_006710191 Length = 1582 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DAVASFAH 9 DAV SFA+ Sbjct: 1282 DAVLSFAN 1289>NP_001004688 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDAVASFA 8 +DAVA+F+ Sbjct: 158 IDAVATFS 165>NP_001004691 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDAVASFA 8 +DAVA+F+ Sbjct: 158 IDAVATFS 165>NP_001004690 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LDAVASFA 8 +DAVA+F+ Sbjct: 158 IDAVATFS 165Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.128 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 313,668 Number of extensions: 444 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |