Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001265432 18 1935 NP_689926 18 1935 NP_001265433 18 1935 NP_000312 17 2528 NP_057636 17 4312 NP_001269700 17 4312 XP_006712630 17 4312 NP_003162 16 7355 NP_588611 16 7355 NP_001026902 16 7355 XP_005275696 16 7355 XP_005275695 16 7355 XP_005275694 16 7355 XP_005265765 16 7355 XP_005265764 16 7355 XP_005265763 16 7355 NP_003349 15 9605 NP_001265644 15 9605 NP_001265643 15 9605 NP_001265629 15 9605 NP_004752 15 9605 NP_001230667 15 9605 NP_001265628 15 9605 NP_006223 15 9605 XP_005275492 15 9605 XP_005275491 15 9605 XP_005275332 15 9605 XP_005275331 15 9605 XP_005275330 15 9605 XP_005275063 15 9605 XP_005275062 15 9605 XP_005275061 15 9605 XP_005272907 15 9605 XP_005272906 15 9605 XP_005272905 15 9605 XP_005249315 15 9605 XP_005249314 15 9605 XP_005249313 15 9605 XP_006713733 15 9605 XP_006713731 15 9605>NP_001265432 Length = 705 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DARLFLIM 9 DAR+F+IM Sbjct: 384 DARIFIIM 391>NP_689926 Length = 705 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DARLFLIM 9 DAR+F+IM Sbjct: 384 DARIFIIM 391>NP_001265433 Length = 613 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DARLFLIM 9 DAR+F+IM Sbjct: 292 DARIFIIM 299>NP_000312 Length = 928 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LDARLFL 7 LDARLFL Sbjct: 331 LDARLFL 337>NP_057636 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDARLFL 7 LDAR+FL Sbjct: 190 LDARIFL 196>NP_001269700 Length = 1030 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDARLFL 7 LDAR+FL Sbjct: 279 LDARIFL 285>XP_006712630 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDARLFL 7 LDAR+FL Sbjct: 190 LDARIFL 196>NP_003162 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDARLF 6 LDARLF Sbjct: 115 LDARLF 120>NP_588611 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DARLFLI 8 DAR FLI Sbjct: 336 DARFFLI 342>NP_001026902 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DARLFLI 8 DAR FLI Sbjct: 354 DARFFLI 360>XP_005275696 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DARLFLI 8 DAR FLI Sbjct: 336 DARFFLI 342>XP_005275695 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DARLFLI 8 DAR FLI Sbjct: 339 DARFFLI 345>XP_005275694 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DARLFLI 8 DAR FLI Sbjct: 354 DARFFLI 360>XP_005265765 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DARLFLI 8 DAR FLI Sbjct: 336 DARFFLI 342>XP_005265764 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DARLFLI 8 DAR FLI Sbjct: 339 DARFFLI 345>XP_005265763 Length = 735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DARLFLI 8 DAR FLI Sbjct: 354 DARFFLI 360>NP_003349 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LDARLFL 7 +DARLF+ Sbjct: 108 VDARLFI 114>NP_001265644 Length = 86 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LDARLFLIM 9 +D+R++L+M Sbjct: 73 VDSRVYLLM 81>NP_001265643 Length = 122 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LDARLFLIM 9 +D+R++L+M Sbjct: 109 VDSRVYLLM 117>NP_001265629 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LDARLFLIM 9 +D+R++L+M Sbjct: 101 VDSRVYLLM 109>NP_004752 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>NP_001230667 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 172 LDAELFL 178>NP_001265628 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LDARLFLIM 9 +D+R++L+M Sbjct: 101 VDSRVYLLM 109>NP_006223 Length = 150 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LDARLFLIM 9 +D+R++L+M Sbjct: 137 VDSRVYLLM 145>XP_005275492 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 172 LDAELFL 178>XP_005275491 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>XP_005275332 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 172 LDAELFL 178>XP_005275331 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>XP_005275330 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>XP_005275063 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 172 LDAELFL 178>XP_005275062 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>XP_005275061 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>XP_005272907 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 172 LDAELFL 178>XP_005272906 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>XP_005272905 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>XP_005249315 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 172 LDAELFL 178>XP_005249314 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>XP_005249313 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LDARLFL 7 LDA LFL Sbjct: 254 LDAELFL 260>XP_006713733 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LDARLFLIM 9 +D+R++L+M Sbjct: 101 VDSRVYLLM 109>XP_006713731 Length = 150 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LDARLFLIM 9 +D+R++L+M Sbjct: 137 VDSRVYLLM 145Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.357 0.166 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 319,217 Number of extensions: 425 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |