Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 509 NP_000170 20 509 NP_001268422 20 509 NP_001268423 20 509 XP_005264328 20 509 NP_001013648 18 1935 XP_006711950 17 2528 XP_005264750 17 2528 NP_057114 17 2528 NP_689598 17 4312 NP_001243264 17 4312 NP_945176 17 4312 NP_079348 17 4312 NP_001129070 17 4312 XP_005252296 17 4312 XP_006712003 17 4312 XP_006712002 17 4312 XP_006712001 17 4312 XP_005264195 17 4312 XP_006712000 17 4312 XP_005264194 17 4312 XP_005264193 17 4312 NP_996836 16 5631 NP_996837 16 5631 NP_996838 16 5631 NP_996839 16 5631 NP_006106 16 5631 NP_065854 16 5631 XP_006725465 16 5631 NP_066988 16 7355 NP_653277 16 7355 NP_065845 16 7355 NP_056051 16 7355 NP_064577 16 7355 XP_006714219 16 7355 XP_006714218 16 7355 XP_006714217 16 7355 XP_006714216 16 7355 XP_005245436 16 7355 XP_006710845 16 7355 NP_000746 15 9605 NP_001171899 15 9605 NP_003638 15 9605 NP_001244292 15 9605 NP_009160 15 9605 NP_001171900 15 9605 NP_060024 15 9605 XP_003403542 15 9605 XP_005261376 15 9605 XP_006724183 15 9605 XP_006724182 15 9605 XP_006724181 15 9605 XP_006724180 15 9605 XP_005257806 15 9605 XP_006722206 15 9605 XP_005268684 15 9605 XP_005251766 15 9605 XP_005251765 15 9605 XP_005251764 15 9605 XP_005251763 15 9605 XP_005247602 15 9605 XP_003403793 15 9605 NP_444513 15 9605 NP_071755 15 9605>NP_001268421 Length = 1230 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDAIEDLML 9 LDAIEDLM+ Sbjct: 662 LDAIEDLMV 670>NP_000170 Length = 1360 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDAIEDLML 9 LDAIEDLM+ Sbjct: 792 LDAIEDLMV 800>NP_001268422 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDAIEDLML 9 LDAIEDLM+ Sbjct: 490 LDAIEDLMV 498>NP_001268423 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDAIEDLML 9 LDAIEDLM+ Sbjct: 490 LDAIEDLMV 498>XP_005264328 Length = 1261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LDAIEDLML 9 LDAIEDLM+ Sbjct: 693 LDAIEDLMV 701>NP_001013648 Length = 228 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DAIEDL L Sbjct: 40 IDAIEDLSL 48>XP_006711950 Length = 389 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DAIEDLML 9 DA++DLML Sbjct: 351 DAVKDLML 358>XP_005264750 Length = 735 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DAIEDLML 9 DA++DLML Sbjct: 351 DAVKDLML 358>NP_057114 Length = 735 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DAIEDLML 9 DA++DLML Sbjct: 351 DAVKDLML 358>NP_689598 Length = 586 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DA+E LM+ Sbjct: 521 IDAVESLMI 529>NP_001243264 Length = 186 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 LDA +DLM Sbjct: 156 LDAFDDLM 163>NP_945176 Length = 186 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 LDA +DLM Sbjct: 156 LDAFDDLM 163>NP_079348 Length = 377 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 LDA +DLM Sbjct: 347 LDAFDDLM 354>NP_001129070 Length = 464 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DA+E LM+ Sbjct: 399 IDAVESLMI 407>XP_005252296 Length = 186 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 LDA +DLM Sbjct: 156 LDAFDDLM 163>XP_006712003 Length = 256 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DA+E LM+ Sbjct: 191 IDAVESLMI 199>XP_006712002 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DA+E LM+ Sbjct: 227 IDAVESLMI 235>XP_006712001 Length = 306 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DA+E LM+ Sbjct: 241 IDAVESLMI 249>XP_005264195 Length = 460 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DA+E LM+ Sbjct: 395 IDAVESLMI 403>XP_006712000 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DA+E LM+ Sbjct: 412 IDAVESLMI 420>XP_005264194 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DA+E LM+ Sbjct: 455 IDAVESLMI 463>XP_005264193 Length = 586 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +DA+E LM+ Sbjct: 521 IDAVESLMI 529>NP_996836 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAIEDL 7 LD+IEDL Sbjct: 232 LDSIEDL 238>NP_996837 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAIEDL 7 LD+IEDL Sbjct: 232 LDSIEDL 238>NP_996838 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAIEDL 7 LD+IEDL Sbjct: 232 LDSIEDL 238>NP_996839 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAIEDL 7 LD+IEDL Sbjct: 232 LDSIEDL 238>NP_006106 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAIEDL 7 LD+IEDL Sbjct: 232 LDSIEDL 238>NP_065854 Length = 620 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DAIEDLM 8 DAIEDL+ Sbjct: 116 DAIEDLV 122>XP_006725465 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LDAIEDL 7 LD+IEDL Sbjct: 232 LDSIEDL 238>NP_066988 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DAIEDLML 9 DAI DL+L Sbjct: 695 DAIRDLIL 702>NP_653277 Length = 240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LDAIED 6 LDAIED Sbjct: 159 LDAIED 164>NP_065845 Length = 1537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DAIEDLML 9 +A+EDL+L Sbjct: 253 EALEDLLL 260>NP_056051 Length = 1469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAIEDLML 9 DA+ DL+L Sbjct: 870 DAVHDLLL 877>NP_064577 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 LD+IED+ L Sbjct: 134 LDSIEDMDL 142>XP_006714219 Length = 806 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAIEDLML 9 DA+ DL+L Sbjct: 436 DAVHDLLL 443>XP_006714218 Length = 846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAIEDLML 9 DA+ DL+L Sbjct: 241 DAVHDLLL 248>XP_006714217 Length = 1013 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAIEDLML 9 DA+ DL+L Sbjct: 423 DAVHDLLL 430>XP_006714216 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAIEDLML 9 DA+ DL+L Sbjct: 436 DAVHDLLL 443>XP_005245436 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DAIEDLML 9 DAI DL+L Sbjct: 695 DAIRDLIL 702>XP_006710845 Length = 1492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DAIEDLML 9 +A+EDL+L Sbjct: 291 EALEDLLL 298>NP_000746 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 L AIEDL+ Sbjct: 525 LQAIEDLV 532>NP_001171899 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 278 DAVEDL 283>NP_003638 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 LDA++D+ + Sbjct: 287 LDAVDDMKI 295>NP_001244292 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 L AIEDL+ Sbjct: 504 LQAIEDLV 511>NP_009160 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 278 DAVEDL 283>NP_001171900 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 278 DAVEDL 283>NP_060024 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 +DAIED + Sbjct: 1348 IDAIEDFV 1355>XP_003403542 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 291 DAVEDL 296>XP_005261376 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 278 DAVEDL 283>XP_006724183 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 237 DAVEDL 242>XP_006724182 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 278 DAVEDL 283>XP_006724181 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 278 DAVEDL 283>XP_006724180 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 278 DAVEDL 283>XP_005257806 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 LDA++D+ + Sbjct: 287 LDAVDDMKI 295>XP_006722206 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 LDA++D+ + Sbjct: 287 LDAVDDMKI 295>XP_005268684 Length = 121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 86 DAVEDL 91>XP_005251766 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 L AIEDL+ Sbjct: 504 LQAIEDLV 511>XP_005251765 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 L AIEDL+ Sbjct: 504 LQAIEDLV 511>XP_005251764 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 L AIEDL+ Sbjct: 521 LQAIEDLV 528>XP_005251763 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 L AIEDL+ Sbjct: 526 LQAIEDLV 533>XP_005247602 Length = 1665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LDAIEDLM 8 +DAIED + Sbjct: 1212 IDAIEDFV 1219>XP_003403793 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 291 DAVEDL 296>NP_444513 Length = 110 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DAIEDL 7 DA+EDL Sbjct: 86 DAVEDL 91>NP_071755 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LDAIEDLML 9 +D+IEDL + Sbjct: 133 VDSIEDLKM 141Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.150 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 448,779 Number of extensions: 681 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |