Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000273 17 4312 NP_001171475 17 4312 NP_001035829 17 4312 NP_001166996 17 4312 NP_004591 17 4312 NP_001166995 17 4312 NP_001244960 17 4312 NP_001035828 17 4312 XP_006721650 17 4312 XP_005254116 17 4312 XP_006711560 17 4312 XP_006711559 17 4312 XP_006711558 17 4312 NP_003546 17 4312 NP_848652 16 5631 XP_006710219 16 5631 NP_001004476 16 5631 NP_065759 16 7355 NP_001128243 16 7355 NP_001243183 16 7355 NP_001243181 16 7355 NP_001965 16 7355 NP_001243184 16 7355 NP_444253 15 9605 NP_067047 15 9605 NP_444255 15 9605 NP_005148 15 9605 NP_055756 15 9605 NP_009297 15 9605 NP_065076 15 9605 NP_002215 15 9605 NP_060587 15 9605 NP_997724 15 9605 NP_006589 15 9605 NP_001264214 15 9605 NP_055445 15 9605 XP_006725069 15 9605 XP_005262187 15 9605 XP_005261449 15 9605 XP_005261448 15 9605 XP_006723662 15 9605 XP_005260825 15 9605 XP_006723661 15 9605 XP_005255053 15 9605 XP_006718858 15 9605 XP_005270021 15 9605 XP_005270020 15 9605 XP_005270019 15 9605 XP_006717280 15 9605 XP_006717279 15 9605 XP_006717278 15 9605 XP_006717277 15 9605 XP_006717276 15 9605 XP_006717275 15 9605 XP_006717274 15 9605 XP_006717273 15 9605 XP_006717272 15 9605 XP_006715155 15 9605 XP_006715154 15 9605 XP_005248288 15 9605 XP_005247550 15 9605 XP_006713712 15 9605 XP_005247549 15 9605 NP_001139669 15 9605 NP_795370 15 9605 NP_064629 15 9605>NP_000273 Length = 728 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CLIVSRTL 9 CL+VSR L Sbjct: 44 CLMVSRNL 51>NP_001171475 Length = 681 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CLIVSRTL 9 CL+VSR L Sbjct: 44 CLMVSRNL 51>NP_001035829 Length = 534 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LCLIVSRT 8 +C++V+RT Sbjct: 399 MCMVVTRT 406>NP_001166996 Length = 518 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LCLIVSRT 8 +C++V+RT Sbjct: 399 MCMVVTRT 406>NP_004591 Length = 538 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LCLIVSRT 8 +C++V+RT Sbjct: 399 MCMVVTRT 406>NP_001166995 Length = 538 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LCLIVSRT 8 +C++V+RT Sbjct: 399 MCMVVTRT 406>NP_001244960 Length = 518 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 CLIVSRTL 9 CL++SRT+ Sbjct: 76 CLLLSRTV 83>NP_001035828 Length = 525 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LCLIVSRT 8 +C++V+RT Sbjct: 399 MCMVVTRT 406>XP_006721650 Length = 313 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LCLIVSRT 8 LCLI+S T Sbjct: 212 LCLIISYT 219>XP_005254116 Length = 640 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CLIVSRTL 9 CL+VSR L Sbjct: 44 CLMVSRNL 51>XP_006711560 Length = 538 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LCLIVSRT 8 +C++V+RT Sbjct: 399 MCMVVTRT 406>XP_006711559 Length = 560 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LCLIVSRT 8 +C++V+RT Sbjct: 421 MCMVVTRT 428>XP_006711558 Length = 560 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LCLIVSRT 8 +C++V+RT Sbjct: 421 MCMVVTRT 428>NP_003546 Length = 313 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LCLIVSRT 8 LCLI+S T Sbjct: 212 LCLIISYT 219>NP_848652 Length = 302 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC VSR+L Sbjct: 127 LCFAVSRSL 135>XP_006710219 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC VSR+L Sbjct: 43 LCFAVSRSL 51>NP_001004476 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC IV RT+ Sbjct: 301 LCKIVRRTI 309>NP_065759 Length = 1116 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LCLIVSRTL 9 +CL+ +RTL Sbjct: 286 ICLLGNRTL 294>NP_001128243 Length = 1139 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LCLIVSRTL 9 +CL+ +RTL Sbjct: 309 ICLLGNRTL 317>NP_001243183 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LCLIVSRTL 9 +CL++++TL Sbjct: 502 VCLLLAKTL 510>NP_001243181 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LCLIVSRTL 9 +CL++++TL Sbjct: 591 VCLLLAKTL 599>NP_001965 Length = 886 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LCLIVSRTL 9 +CL++++TL Sbjct: 643 VCLLLAKTL 651>NP_001243184 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LCLIVSRTL 9 +CL++++TL Sbjct: 466 VCLLLAKTL 474>NP_444253 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCLIVSRT 8 LCL+ +RT Sbjct: 472 LCLLKART 479>NP_067047 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>NP_444255 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCLIVSRT 8 LCL+ +RT Sbjct: 472 LCLLKART 479>NP_005148 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LCLIVSR 7 LCL +SR Sbjct: 1039 LCLAISR 1045>NP_055756 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIVSRT 8 CL +SRT Sbjct: 65 CLFLSRT 71>NP_009297 Length = 1149 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LCLIVSR 7 LCL +SR Sbjct: 1058 LCLAISR 1064>NP_065076 Length = 1873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC+ +SR L Sbjct: 611 LCVYISREL 619>NP_002215 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC+ V RTL Sbjct: 1661 LCIKVLRTL 1669>NP_060587 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLIVSR 7 CL+VSR Sbjct: 913 CLLVSR 918>NP_997724 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC+ + RTL Sbjct: 241 LCITIWRTL 249>NP_006589 Length = 1083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LCLIVSRTL 9 +CL+ +RTL Sbjct: 307 VCLLGNRTL 315>NP_001264214 Length = 1437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIVSRT 8 CLI +RT Sbjct: 620 CLIANRT 626>NP_055445 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC + S+TL Sbjct: 616 LCTLCSKTL 624>XP_006725069 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LCLIVSRTL 9 +CL+ +RTL Sbjct: 307 VCLLGNRTL 315>XP_005262187 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC+ + RTL Sbjct: 37 LCITIWRTL 45>XP_005261449 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIVSRT 8 CL +SRT Sbjct: 127 CLFLSRT 133>XP_005261448 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIVSRT 8 CL +SRT Sbjct: 127 CLFLSRT 133>XP_006723662 Length = 1920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC+ +SR L Sbjct: 611 LCVYISREL 619>XP_005260825 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC+ +SR L Sbjct: 611 LCVYISREL 619>XP_006723661 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC+ +SR L Sbjct: 611 LCVYISREL 619>XP_005255053 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC + S+TL Sbjct: 616 LCTLCSKTL 624>XP_006718858 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIVSRT 8 CLI +RT Sbjct: 96 CLIANRT 102>XP_005270021 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLIVSR 7 CL+VSR Sbjct: 442 CLLVSR 447>XP_005270020 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLIVSR 7 CL+VSR Sbjct: 654 CLLVSR 659>XP_005270019 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLIVSR 7 CL+VSR Sbjct: 654 CLLVSR 659>XP_006717280 Length = 2221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717279 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717278 Length = 2566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717277 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717276 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717275 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717274 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717273 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717272 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIVSRTL 9 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006715155 Length = 1850 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC+ V RTL Sbjct: 1690 LCIKVLRTL 1698>XP_006715154 Length = 2700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LC+ V RTL Sbjct: 1690 LCIKVLRTL 1698>XP_005248288 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LCLIVSRTL 9 +CL+ +RTL Sbjct: 307 VCLLGNRTL 315>XP_005247550 Length = 1856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCLIVSRT 8 LCL+ +RT Sbjct: 482 LCLLKART 489>XP_006713712 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCLIVSRT 8 LCL+ +RT Sbjct: 482 LCLLKART 489>XP_005247549 Length = 1924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCLIVSRT 8 LCL+ +RT Sbjct: 482 LCLLKART 489>NP_001139669 Length = 7081 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 CLIVSRT 8 C+++SRT Sbjct: 5546 CVVLSRT 5552>NP_795370 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LCLIVS 6 LCLI+S Sbjct: 243 LCLIIS 248>NP_064629 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCLIVSRTL 9 LCL +SR L Sbjct: 369 LCLQISRHL 377Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.150 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,051 Number of extensions: 575 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |