Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 17 3301 XP_006713721 17 3301 NP_116165 17 4312 NP_001269877 17 4312 XP_005269684 17 4312 XP_005269683 17 4312 XP_005269681 17 4312 XP_006717770 17 4312 XP_005269679 17 4312 NP_079236 16 5631 NP_705902 16 5631 NP_705904 16 5631 NP_001278367 16 5631 NP_079388 16 5631 NP_001035743 16 5631 XP_006723694 16 5631 XP_005260892 16 5631 XP_005260893 16 5631 XP_006718234 16 5631 XP_005247814 16 5631 XP_006713804 16 5631 NP_055979 16 7355 NP_683878 16 7355 NP_683879 16 7355 NP_612189 16 7355 NP_620124 16 7355 NP_064715 16 7355 NP_059115 16 7355 NP_078870 16 7355 XP_005259159 16 7355 XP_006721036 16 7355 XP_005255721 16 7355 XP_006721035 16 7355 XP_006721034 16 7355 XP_006721033 16 7355 XP_005255720 16 7355 XP_005255719 16 7355 XP_005255718 16 7355 XP_005255717 16 7355 XP_005267426 16 7355 XP_005269959 16 7355 XP_005245848 16 7355 XP_005245847 16 7355 NP_689660 16 7355 NP_065913 16 7355 NP_001005279 16 7355 NP_001007250 15 9605 NP_000501 15 9605 NP_001018090 15 9605 NP_001164265 15 9605 NP_068585 15 9605 NP_001186028 15 9605 NP_001186026 15 9605 NP_001186027 15 9605 NP_001186025 15 9605 NP_003924 15 9605 NP_001129504 15 9605 NP_006844 15 9605 NP_001273393 15 9605 NP_001177695 15 9605 NP_001161077 15 9605 XP_006715608 15 9605 XP_005248816 15 9605 XP_005248815 15 9605 NP_659196 15 9605>NP_006209 Length = 1068 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LCEATLITI 9 L EATLITI Sbjct: 37 LREATLITI 45>XP_006713721 Length = 1068 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LCEATLITI 9 L EATLITI Sbjct: 37 LREATLITI 45>NP_116165 Length = 2540 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CEATL I Sbjct: 1849 CEATLFNI 1856>NP_001269877 Length = 2358 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CEATL I Sbjct: 1667 CEATLFNI 1674>XP_005269684 Length = 2032 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CEATL I Sbjct: 1849 CEATLFNI 1856>XP_005269683 Length = 2252 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CEATL I Sbjct: 1561 CEATLFNI 1568>XP_005269681 Length = 2321 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CEATL I Sbjct: 1630 CEATLFNI 1637>XP_006717770 Length = 2358 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CEATL I Sbjct: 1667 CEATLFNI 1674>XP_005269679 Length = 2502 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CEATL I Sbjct: 1811 CEATLFNI 1818>NP_079236 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATLITI Sbjct: 198 LARATLITI 206>NP_705902 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATLITI Sbjct: 489 LARATLITI 497>NP_705904 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATLITI Sbjct: 198 LARATLITI 206>NP_001278367 Length = 304 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC +T+IT Sbjct: 84 LCHSTIIT 91>NP_079388 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CE T IT+ Sbjct: 304 CEKTFITV 311>NP_001035743 Length = 710 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CE T IT+ Sbjct: 304 CEKTFITV 311>XP_006723694 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATLITI Sbjct: 198 LARATLITI 206>XP_005260892 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATLITI Sbjct: 284 LARATLITI 292>XP_005260893 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATLITI Sbjct: 339 LARATLITI 347>XP_006718234 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CEATLITI 9 CE +L+TI Sbjct: 690 CETSLLTI 697>XP_005247814 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CE T IT+ Sbjct: 304 CEKTFITV 311>XP_006713804 Length = 769 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CE T IT+ Sbjct: 304 CEKTFITV 311>NP_055979 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CEATLITI 9 CEA+ +T+ Sbjct: 735 CEASAVTV 742>NP_683878 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATL+TI Sbjct: 514 LARATLVTI 522>NP_683879 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATL+TI Sbjct: 289 LARATLVTI 297>NP_612189 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATL+TI Sbjct: 230 LARATLVTI 238>NP_620124 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 362 LCQWTLVT 369>NP_064715 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CEATLI 7 CEATL+ Sbjct: 277 CEATLL 282>NP_059115 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 CEATLITI 9 C A+LITI Sbjct: 453 CGASLITI 460>NP_078870 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATL+TI Sbjct: 289 LARATLVTI 297>XP_005259159 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LCEATLIT 8 LCE LIT Sbjct: 295 LCEPPLIT 302>XP_006721036 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 222 LCQWTLVT 229>XP_005255721 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 236 LCQWTLVT 243>XP_006721035 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 255 LCQWTLVT 262>XP_006721034 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 256 LCQWTLVT 263>XP_006721033 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 256 LCQWTLVT 263>XP_005255720 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 329 LCQWTLVT 336>XP_005255719 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 344 LCQWTLVT 351>XP_005255718 Length = 601 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 345 LCQWTLVT 352>XP_005255717 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 LC+ TL+T Sbjct: 363 LCQWTLVT 370>XP_005267426 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LCEATLIT 8 LCE LIT Sbjct: 283 LCEPPLIT 290>XP_005269959 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 L ATL+TI Sbjct: 455 LARATLVTI 463>XP_005245848 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CEATLITI 9 CEA+ +T+ Sbjct: 532 CEASAVTV 539>XP_005245847 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CEATLITI 9 CEA+ +T+ Sbjct: 715 CEASAVTV 722>NP_689660 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LCEATLIT 8 LCE LIT Sbjct: 283 LCEPPLIT 290>NP_065913 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LCEATLIT 8 LCE LIT Sbjct: 295 LCEPPLIT 302>NP_001005279 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LCEATLITI 9 +CE L+T+ Sbjct: 108 ICEVCLLTV 116>NP_001007250 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LCEATLIT 8 +C +T+IT Sbjct: 84 ICHSTIIT 91>NP_000501 Length = 129 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CE T ITI Sbjct: 21 CELTNITI 28>NP_001018090 Length = 129 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CEATLITI 9 CE T ITI Sbjct: 21 CELTNITI 28>NP_001164265 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LCEATLI 7 LC+ TLI Sbjct: 36 LCDVTLI 42>NP_068585 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LCEATLI 7 LC+ TLI Sbjct: 36 LCDVTLI 42>NP_001186028 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LCEATL 6 +CEATL Sbjct: 710 VCEATL 715>NP_001186026 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LCEATL 6 +CEATL Sbjct: 738 VCEATL 743>NP_001186027 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LCEATL 6 +CEATL Sbjct: 715 VCEATL 720>NP_001186025 Length = 1116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LCEATL 6 +CEATL Sbjct: 702 VCEATL 707>NP_003924 Length = 1187 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LCEATL 6 +CEATL Sbjct: 773 VCEATL 778>NP_001129504 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LCEATLI 7 LC ATLI Sbjct: 46 LCGATLI 52>NP_006844 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LCEATLI 7 LC ATLI Sbjct: 46 LCGATLI 52>NP_001273393 Length = 1169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LCEATL 6 +CEATL Sbjct: 755 VCEATL 760>NP_001177695 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CEATLI 7 C+ATLI Sbjct: 245 CDATLI 250>NP_001161077 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LCEATLI 7 LC ATLI Sbjct: 46 LCGATLI 52>XP_006715608 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LCEATLI 7 LC+ TLI Sbjct: 72 LCDVTLI 78>XP_005248816 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LCEATLI 7 LC+ TLI Sbjct: 36 LCDVTLI 42>XP_005248815 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LCEATLI 7 LC+ TLI Sbjct: 72 LCDVTLI 78>NP_659196 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LCEATLI 7 LC ATLI Sbjct: 78 LCGATLI 84Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.141 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 524,043 Number of extensions: 750 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |